Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1703 ATGGCTCCCGCTAAAGTTGATAGTTCTAAGAAGGGTGATCCTAAGGCACAGGCTTTGAAAACTGCGAAAGCGGTGAAATCAGGCCCAACCTTTAAGAAGAAGGCAAAGAAAATCAGAACTAAGGTTACCTTCCATAGGCCAAAGACATTGACAAAGGATAGGAACCCAAAATATCCTCGCATTAGTGCTCCACCTAGGAACAAGCTTGATCATTATCAGATCTTGAAATTTCCTCTCACTACCGAGTCTGCGATGAAGAAGATTGAAGACAACAACACCTTGGTCTTCATTGTTGACCTCCGTGCCGACAAGAAGAAGATTAAGGATGCAGTTAAGAAAATGTATGACATCCAGGCCAAGAAGGTCAACACCTTGATCAGGCCTGATGGCACCAAGAAGGCCTATGTGAGGTTGACTCCTGATTATGATGCTTTGGATGTGGCAAACAAGATTGGCATTATCTAA 465 0.4344 MAPAKVDSSKKGDPKAQALKTAKAVKSGPTFKKKAKKIRTKVTFHRPKTLTKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1703 154 MobiDBLite consensus disorder prediction 27 45 - -
Lan8g1703 154 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lan8g1703 154 Gene3D - 35 154 IPR012677 -
Lan8g1703 154 Hamap 50S ribosomal protein L23 [rplW]. 74 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Lan8g1703 154 ProSitePatterns Ribosomal protein L23 signature. 132 147 IPR001014 -
Lan8g1703 154 Pfam Ribosomal protein L23, N-terminal domain 15 64 IPR005633 -
Lan8g1703 154 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 154 - -
Lan8g1703 154 MobiDBLite consensus disorder prediction 1 65 - -
Lan8g1703 154 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 71 147 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lan8g1703 154 TIGRFAM uL23_arch: ribosomal protein uL23 78 154 IPR019985 GO:0003735|GO:0005840|GO:0006412
Lan8g1703 154 Pfam Ribosomal protein L23 74 136 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1703 Lan-Chr8 23906140 23907870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1703 1 154 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 88.961 5.41e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1703 K02893 - jre:109021970 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0259 7 1651936 1653333 Lan8g1703 8 23906140 23907870 LSH
Lan8g1703 8 23906140 23907870 Lan13g0346 13 2270128 2271868 LSH
Lan10g0105 10 610865 612829 Lan8g1703 8 23906140 23907870 PCT
Lan8g1703 8 23906140 23907870 Lan10g0105 10 610865 612829 PCT