Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1700 ATGCCTACAAAAACAATGAGAAGCATTTTCTTCAAATCTTCAACCCTTCCATCGTTACCATTTCCACCTTCCTCTCCTCACCGTACCTTCTCAGATTCCTTGATGGAAGAAAACATCGAAAACGCAGAGTCCGTTATAACTAAATGGAACTCCGTAACGGACCAGTCATCATCCTCCTACGCAAAACTCACCCCTCTGTTCAATGGAACCCGCTTGGAAGCAAAACAGTACATTAACGCCGTTAAGGGTCTACAATCCACTATGGAGCATCTGGTTGCACAGGATCCTAACTCTAAGACACTGGTGAAATCACAATTCTTAATGCAACTAGCTATGAAGACGCTAGAGAAAGAGTTCTATCGGATATTATCTTCAAATAGAGAATACTTGGATTCAGAAACCGTTTCGAACCGTTCTTCATCTGACCGGAGAAGAAGTTTTTCCGATTACGATGACGAAATCACCGAGGATGATGAGTTTAGCGTTGCCGGAAACTCCATCTCCGAGACGGAGAGGATGTCAATGATTGCTATGGCGGATTTGAAGGCTATCGCTGATTGCATGATTTCCTCCGGCTATGCCAGAGAGTGTGTCAAGATATACATCGTCATGAGAAAATCGATCGTTGATGAAGCTCTGTACCATCTCGGAGTGGAACGATTGAGTTTCTCCCAGGTTCAAAAGATGGAGTGGGAGGTGGTTGAGTTGAAAATTAAGACATGGTTGAATGCCGTGAAAGCCGCCGTCGGCAACGTTTTTTACGGTGAGAGAATCCTCTGCGATCATATTTTCTCCGCTGCGTCGGAGAAGAGAGTCGCGGAGTCATGCTTCACTGAGATTACCAGAGAAGGCGCAATGTTGCTGTTTGGATTCCCGGAAATGGTGGCAAAGTGCAAGAAAACTCCTGAGAAATTGTTCAAGACTTTGGATCTGTACGAAGCCATCTCTGACAACTGGCCTCAAATTGAATCCATTTTCTCATTGGAATCAACCTCCGGTGTCCGTACAACGGCGTTTACCTCACTATTGAAACTCGGCGACGCCGTTCGTACGATGTTATCGGAGTTCGAATCGGCGATTCAGAAAGACTCCTCAAAGGTTGCGGTACCTTCCGGAGGGGTCCATCCTCTCACTCGCTACGTTATGAACTACATCACGTTCCTTGCAGATTACAGCGGCGTCCTTGGCGATATCATCGCCGATTGTCCACAATCTCCGTTGCCGGAAACATACTATCGCAGTCCAATGCGCGATGAAAATCCGTTAGTATCCGATATATCAGAACGAATCGCGTGGTTAATACTCGTCCTTCTCTGCAAACTCGACGCAAAAGCGAAACTCTACAACGATGTGGCACTCTCTTACACATTCCTCGCCAATAACATGCAATACGTCGTCGTAAAGGTTCGTAGATCAAACCTAGGGTTCCTTCTTGGAGAAGATTGGTTGGCAAAACACGAGGCCAAGGTTAAAGAGTACTTATCCAAATACGAACGCGTGGGATGGAGCAAGGTATTGTCATCGTTGCCGGAAAATCCCACGGCGGCGATGCCGGCAGAGCAAATTAGAGCCACCTTCATGAGCTTCAACGCAGCGTTTAAAGAAACGTGCAGGAAACAGTCCACGTGGATCGTATTGGACGCGAAACTACGAGATGAAATTAAAATTTCGATATCTTCAAAGGTGGTGGACAAGTATAAGAAATTTTATGAAAAGAATCGGTCCGGGTCGGATCCGGTTAACGGGTTATTACCCGAAGATGTAACGAATTACTTGTCTGACATTTTAAATGGGAATGGTGATTCCGGTGGTGGCTCATCACATTCTTCTTCCACCACCTCTTCTTCTCATCGCTCGCCGGCGAGGTTGGACCAATCCCAATAG 1884 0.4618 MPTKTMRSIFFKSSTLPSLPFPPSSPHRTFSDSLMEENIENAESVITKWNSVTDQSSSSYAKLTPLFNGTRLEAKQYINAVKGLQSTMEHLVAQDPNSKTLVKSQFLMQLAMKTLEKEFYRILSSNREYLDSETVSNRSSSDRRRSFSDYDDEITEDDEFSVAGNSISETERMSMIAMADLKAIADCMISSGYARECVKIYIVMRKSIVDEALYHLGVERLSFSQVQKMEWEVVELKIKTWLNAVKAAVGNVFYGERILCDHIFSAASEKRVAESCFTEITREGAMLLFGFPEMVAKCKKTPEKLFKTLDLYEAISDNWPQIESIFSLESTSGVRTTAFTSLLKLGDAVRTMLSEFESAIQKDSSKVAVPSGGVHPLTRYVMNYITFLADYSGVLGDIIADCPQSPLPETYYRSPMRDENPLVSDISERIAWLILVLLCKLDAKAKLYNDVALSYTFLANNMQYVVVKVRRSNLGFLLGEDWLAKHEAKVKEYLSKYERVGWSKVLSSLPENPTAAMPAEQIRATFMSFNAAFKETCRKQSTWIVLDAKLRDEIKISISSKVVDKYKKFYEKNRSGSDPVNGLLPEDVTNYLSDILNGNGDSGGGSSHSSSTTSSSHRSPARLDQSQ* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1700 627 Gene3D Exocyst complex component Exo70 56 602 - -
Lan8g1700 627 SUPERFAMILY Cullin repeat-like 39 594 IPR016159 -
Lan8g1700 627 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 11 603 - -
Lan8g1700 627 Pfam Exo70 exocyst complex subunit 240 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan8g1700 627 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 603 IPR004140 GO:0000145|GO:0006887
Lan8g1700 627 MobiDBLite consensus disorder prediction 594 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1700 Lan-Chr8 23887809 23889784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1700 22 599 EXO70 exocyst subunit family AT5G59730 48.350 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1700 K07195 - gmx:100808078 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0262 7 1680726 1682808 Lan8g1700 8 23887809 23889784 LSH