Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1696 ATGATTTGCTTTTGGTGGAAAAGGAAATCATCCAAAAATTCACAGAAGAAGACCAAAGACTATAGCCACACCCACAAGCTCACCAATCACACTTCCCTTGATAAGGTCAAAGTTGATTTAAAACTGAATGGAAAAAAAGATGACTCCAAGAATGATCAACTTGCTCTGGATTTGAAGAGTTTAAAATTGAAAGTGCCAATTTCGGCAGATGGAAATGATAATGGTAGCCGGGCGCAGACATTCAGCTTTGATGAACTTGCAGCTGCAACAGGAAATTTCAGGTCAGATTGTTTTTTAGGTGAAGGAGGCTTTGGCAAGGTTTACAGGGGGCAATTGGAAAAAATAAACCAGGTTGTAGCTATCAAGCAACTTGACCCTCATGGAGTTCAAGGAATTCGGGAATTTGTTGTTGAAGTGTTGACACTGAGTTTAGCAGATCATCCTAACCTTGTCAAGTTGATTGGCTTTTGTGCCGAGGGAGAGCAGAGGCTATTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAGCCATTTGCTCGATCTTCTGCCCGGTAGAAAACCGCTTGATTGGAATACGAGGATGAAAATAGCAGCAGGTGCAGCTAGTGGTTTGGAGTATTTGCATAATAAAATGAAGACTCCTGTCATATACCGTGATTTGAAATGCTCGAACATTTTGTTAGGCGAGGGATATCATCCCAAGTTATCTGATTTTGGTTTGGCAATAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGTACATATGGATATTGTGCTCCAGATTATGCAATGACAGGTAAATTAACATTCAAGTCAGATATTTACAGCTTCGGGGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAAGCCATTGACCCTACAAAATCTCACAAAGAAAAAAACTTGGTTGCATGGGCAAGACCCTTATTCAAAGATCGAAAGAAATTCCCACAAATGGTTGATCCATTGCTTGAAGGTCAATATCCGGCGAGAGGTTTATACCAAGCTCTTGCTATTACTGCAATGTGTGTTCAAGAGCAGCCTAATATGCAGCCTGCTATAGGTGATGTGGTTACAGCTCTAAATTATGTTACTTCCCAAAAATATGATCCTCAAATTGATCGTGTACAAAGATGTAGAAGTCCATCCTCTCCAAGAGTAAGAAGGGGTGATCATAAACATAAACACAATGTTAGTGATGATGGAAATGAGAGAGACAGGTCTGTAAACTAG 1251 0.4077 MICFWWKRKSSKNSQKKTKDYSHTHKLTNHTSLDKVKVDLKLNGKKDDSKNDQLALDLKSLKLKVPISADGNDNGSRAQTFSFDELAAATGNFRSDCFLGEGGFGKVYRGQLEKINQVVAIKQLDPHGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLESHLLDLLPGRKPLDWNTRMKIAAGAASGLEYLHNKMKTPVIYRDLKCSNILLGEGYHPKLSDFGLAIVGPSGDKTHVSTRVMGTYGYCAPDYAMTGKLTFKSDIYSFGVVLLELITGRKAIDPTKSHKEKNLVAWARPLFKDRKKFPQMVDPLLEGQYPARGLYQALAITAMCVQEQPNMQPAIGDVVTALNYVTSQKYDPQIDRVQRCRSPSSPRVRRGDHKHKHNVSDDGNERDRSVN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1696 416 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1696 416 CDD STKc_IRAK 99 368 - -
Lan8g1696 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lan8g1696 416 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 8 400 - -
Lan8g1696 416 SUPERFAMILY Protein kinase-like (PK-like) 79 388 IPR011009 -
Lan8g1696 416 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Lan8g1696 416 MobiDBLite consensus disorder prediction 379 416 - -
Lan8g1696 416 Gene3D Transferase(Phosphotransferase) domain 1 170 387 - -
Lan8g1696 416 Pfam Protein tyrosine and serine/threonine kinase 98 304 IPR001245 GO:0004672|GO:0006468
Lan8g1696 416 PANTHER OS07G0668900 PROTEIN 8 400 - -
Lan8g1696 416 Gene3D Phosphorylase Kinase; domain 1 64 169 - -
Lan8g1696 416 MobiDBLite consensus disorder prediction 400 416 - -
Lan8g1696 416 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1696 Lan-Chr8 23831992 23835766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1696 74 370 Glycoside Hydrolase AT3G07070 63.636 1.67e-141 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan8g1696 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1696 - - gmx:100804000 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1696 8 23831992 23835766 Lan13g0357 13 2349021 2352631 LSH
Lan6g1960 6 30532900 30536665 Lan8g1696 8 23831992 23835766 PCT
Lan3g0071 3 469551 472522 Lan8g1696 8 23831992 23835766 PCT
Lan8g1696 8 23831992 23835766 Lan6g1960 6 30532900 30536665 PCT
Lan8g1696 8 23831992 23835766 Lan3g0071 3 469551 472522 PCT