Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1684 ATGGCATTGCATTCTCTTGTTAAAGATTCAATGTCCTGCCTTAATATTTTCAGAATAATTTCATCCCTTATTTTCATATCAACCCTTCTTCATACAGCATCTGCATCAAACTCTACCAATGCCCTCAACACATATAAAAAGTTCATAAAAGTTAAGTGCTATTCAACCACTTATTCAGATGTTTGCTACAAGTCTCTTTCCCCTTATGCATCAAAAATCAAAACAAACACTTTCACACTCACCAAAACATCTGTTTATCTGGCTCTAAATGCAACCAAAACTGCATATGTAACATTGAAAAAACTATCCAAATCCAAGGGGAACCTAACACATGCAGAGACAGAGGTACTTGCTGACTGCAAAGACAATATCGGTGACACCGTGGATCTGCTTCAACAATCTGCTGATACCCTTGGATATTTGAACGGTATCACTACCGACGAAGAGAGGTTTCAATGGGATGGCATAAAAACATGGATGAGTGCTTCCATAACAGATGAGGGTACATGCACAGATGAGTTCGACGAAATGGAAGTGCAGCCTTCACTGCAGAAGAAGATCAAACCCATTGTTGCTAATGTTGCTAAGAAGAATAGCATTGCTCTGGCTCTTGTCAACAACCTTTCTTACTAA 633 0.3886 MALHSLVKDSMSCLNIFRIISSLIFISTLLHTASASNSTNALNTYKKFIKVKCYSTTYSDVCYKSLSPYASKIKTNTFTLTKTSVYLALNATKTAYVTLKKLSKSKGNLTHAETEVLADCKDNIGDTVDLLQQSADTLGYLNGITTDEERFQWDGIKTWMSASITDEGTCTDEFDEMEVQPSLQKKIKPIVANVAKKNSIALALVNNLSY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1684 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 209 IPR035513 -
Lan8g1684 210 CDD PMEI-like_3 53 209 - -
Lan8g1684 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 208 IPR035513 -
Lan8g1684 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 208 - -
Lan8g1684 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 208 IPR006501 GO:0004857
Lan8g1684 210 Pfam Plant invertase/pectin methylesterase inhibitor 48 204 IPR006501 GO:0004857
Lan8g1684 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 208 - -
Lan8g1684 210 SMART PMEI_2 44 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1684 Lan-Chr8 23745877 23746781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1684 49 209 Carbohydrate Esterase AT1G53830 28.571 2.15e-12 63.5