Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1676 ATGGTTTTTAAAGGAGAAGATCCATATTTACGTGTTTCTCAGGAAGCTATAATGGCTATCAATAAAGCTTCGGAGAATTTTCTAGAACAATTTACGCTGGACGCTTATACTCGTTCTGTTCAGGAGAGAAAGAAAACTCTGAGTTATGTGCACTTAGCACATGTTGTTAGTAAGGAGAGGAGATATGACTTTCTTTCTGATTTTGTTCCTGGGAAAGTGGAAGCTGAGAATGGATTAAGAGAGAGAAATTCAGGAGGGATTGGAGGAGGTTAG 273 0.3883 MVFKGEDPYLRVSQEAIMAINKASENFLEQFTLDAYTRSVQERKKTLSYVHLAHVVSKERRYDFLSDFVPGKVEAENGLRERNSGGIGGG* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1676 90 Gene3D Histone, subunit A 4 73 IPR009072 GO:0046982
Lan8g1676 90 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 84 - -
Lan8g1676 90 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR AND ARCHAEAL HISTONE FAMILY PROTEIN, EXPRESSED 4 84 - -
Lan8g1676 90 SUPERFAMILY Histone-fold 4 72 IPR009072 GO:0046982
Lan8g1676 90 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 7 56 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1676 Lan-Chr8 23686663 23688797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1676 2 55 CCAAT-HAP5 Transcription Factor Family AT1G07980 33.333 6.01e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1676 - K03506 lang:109353607 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1676 8 23686663 23688797 Lan13g0375 13 2524635 2525996 LSH