Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1675 ATGTTGAATAAGACTTGTTCATTTGCAAAATCTATGGGCTGCTGTAATTGCTTTGGGTTCATCAGGAGACCGAGATCGAGACGCCAAAGGCCTAAGCACACAATCAGTAGTAATAATAATATATCTCAGGAACTGTTGTTGGATGACGACATTGACGTTGATGATCGTTCGTACAGTGACAGTGCCACTAACACAAGTAGTGGTGATGATGGTGAGCAGAAAGTTCGTCCCAAACGATCAGAGGACATTTTGAATTTGAGAGTAGAGAATGACATGATGTGTAGGCAGTTTCCTGTTAAGGAGACTCACAAAGTTGTTCGCTCAGAGGATGAATATGGGAACAAGATGATAAATGAGTATATCCGTGAGTGTAAGATTGGTTCTGGCAGCTATGGGAAAGTTGCCCTCTATCGAAGTTCTGTCGACGGAAACCATTATGCAATAAAGGCCTTTCATAAGTCTTATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGACTGATGTTCTACGTGAGGTACTCATTATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGATTCGGATAACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGTCATGGTACGGGTCCTGCTTGTAGCCTAGGTGAAGATATTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTGACATATCTCCATGCTCATCATATAGTACATGGGGATATTAAACCTGATAATCTGTTGATCACTCGTCACGGTACAGTAAAGATCGGGGATTTCAGTGTCAGCCAAGCTTTTGAGGATGATAAGGATGACCTTCGTCGGTCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTATTTTAGGTCTTACCTATCATGGCAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATACCCTTTTCTCGGAGACACACTTCAAGACACATACGACAGAATAGTCAATAATCCTATAGTACTCCCAAATGATATGAACCCGCAGTTAAAGAACTTAATAGAAGGACTACTTTCCAAAGATCCAAGACTAAGGATGACATTGAATGACGTTGCTGAGCATAGCTGGGTTATTGGAGATGATGGGCCAATTCCGGGGTACCTGTGTTGGTGCGAAAGGAAGTGCTTTGAAAGGGAAGACACTGATGAGAGCAATATGCTTGCTTGA 1239 0.4205 MLNKTCSFAKSMGCCNCFGFIRRPRSRRQRPKHTISSNNNISQELLLDDDIDVDDRSYSDSATNTSSGDDGEQKVRPKRSEDILNLRVENDMMCRQFPVKETHKVVRSEDEYGNKMINEYIRECKIGSGSYGKVALYRSSVDGNHYAIKAFHKSYLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPDSDNFYMVLEYVEDKWVCHGTGPACSLGEDIARRYLRDIVSGLTYLHAHHIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDKDDLRRSPGTPVFTAPECILGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPNDMNPQLKNLIEGLLSKDPRLRMTLNDVAEHSWVIGDDGPIPGYLCWCERKCFEREDTDESNMLA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1675 412 CDD STKc_LKB1_CaMKK 126 381 - -
Lan8g1675 412 Pfam Protein kinase domain 122 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1675 412 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Lan8g1675 412 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1675 412 MobiDBLite consensus disorder prediction 57 79 - -
Lan8g1675 412 Gene3D Phosphorylase Kinase; domain 1 114 215 - -
Lan8g1675 412 Gene3D Transferase(Phosphotransferase) domain 1 219 387 - -
Lan8g1675 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Lan8g1675 412 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1675 412 SUPERFAMILY Protein kinase-like (PK-like) 116 389 IPR011009 -
Lan8g1675 412 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 409 - -
Lan8g1675 412 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1675 Lan-Chr8 23678504 23684164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1675 126 388 CBL-interacting serine-threonine protein kinases AT5G35410 32.700 3.09e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Lan8g1675 Pkinase 2.9e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1675 K00908 - gmx:100789178 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1675 8 23678504 23684164 Lan13g0376 13 2536225 2541146 LSH