Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1674 ATGAGTGAAAGTGTGGCACAGCTTCAAACGGCGGAGCCTCTTCTCAACATGGATTTATCTTCTTCCAAAACCCTAAACCCAATCAACGCTCAGGATTCAACACCCGAGTCACATCTAACGGTTCCGAATGAACCTCAAATCACTCCCGTAAACGACGACGTCGTTGTCGGTGAGAAACGGAAGAGAGACGACGGCGACGACGTCTCCATCCAAGATAATGATGGCACCAACACCATCGCGTGCATCCACGCGCACACGGAGGAGGAGTTAGTTCCTCATCCCGAAATCACGCGCGACACAACATCCGAGCCTGCGAAGAAGGTGTTGAAGATCGAAGAGAAACGCAGCGTTTCGGAGGATAGCATGGTTATCGACGACGCCTTCGTTGAAGGTAGTGATTGTTATGGTTCCATTAACGAGTTTAGCATATGTGTGGTGAATTTGCCGAAGAGGTGGTGCAACTCGAAATTGAGAAATTTTCTCAAAGACCAGGGTGTGCCTTTTAAGCATACAAAGAAAAAGAAAACAATGGGGCAAGGTGTCATCATTTTTGAAAATGCAGAACAAATATTAAGTGCCACAAAGAAGTTAGATGGAAAAATGGCTGGTGGCAGAACACTAAAGGTCACTGGTGTCATTCCTCAATCATTCGGAAAGAAGAAAAGTGATAAGGAGAATGTGTCGGTAGATGCTGAAACAAATGATGATAATTCAAAGGCAAAAAATGTGCGCGATATAGTGACCCCTCTAGCTCACTTGCCCTATGCTGATCAATTGGAGCAGAAAAAAAGCTCTCTCATACCGATGCTCAAAAAACTTACCCGAAATACACGTAAAGCTTGTGAAACTGGGGTTTCTCTTCCTGAGTGGGTTCTGAAGTCGAAGGAAATAGCCGGTCTTCCATGTGAGCTAGAGGGTATTATTGCATCACCAATTGTAAATGGATATCGTAATAAGTGTGAATTTTCTGTTGGGTATTCTATGAAGGGCAAAGTAACAGTGGGCTTCATGCTTGGAGACTTCAGGGAGGGTGTAACAGCAGTTGAGGAAGCATTGGACTGCCCAAATGTTTCTGAAATTGCTTGCAAATATGCTACCATCTTTCAGGAATTTCTGCAGCATTCTGATTTACCAGTTTGGAACAGTTCTACAAATACTGGATTTTGGCGTCAATTGACGGTTCGAGAAGGGAGGACAAATGGAAATGCTGTTGGTTCTGAAGCTTTTAATGGTATTGCTGAGGTCATGCTTATCATGCAGGTTTCTACTTCTGGCTTTGATGATGCACAAGTTGCTGCTGAATTCAAGAGACTTGCTCAGGCTTTTGTTGCAGGAGCCACTTCACATTCTCCAACATTGCCTCTCACAACTCTGGTTGTGCAGGATCACCAAGGAATATCCAATGTAGCACCAGCTGATGCACCTCTTCATTCACTTCCCATTCCTAAAGCAGTTGGTCATCCTGAGATGGATGAGAAAAGTGCCGCACACACAAGAATCCATGATTATATCAGCAATCTCCAATTCTCTATATCTCCGACAGCATTTTTCCAGGTTAACACTCTTGCTGCCGAGAAGCTATACTCACTTGCTGGAGATTGGGCATGCTTAGGTCCTGATACGTTGCTATTTGACATATGTTGTGGGACAGGAACAATCAGCTTGACTTTAGCACATCGAGTTGGCAAGGTTGTTGGAATTGAAATGGACGCTTCTGCTGTATCTGATGCTCGTAGGAATGCTGAGATTAATGGCATTAAAAACTGTGAATTTATATGTTCAAAGGCAGAGGATGTCATAGGGTTACTGTTAAAGGAATATGAAAATGTGGCAAAGGAACAAGTTGATGATCCTAATATCTCTGGAAGTAGCAATGTTGTCTCTAAGGACAGTTCCTGCAAAGAGCCTAAAATTGGTGAAAATGAATCTCTGCAATATCATTGTTCAGAAAATAACAATACAAACAACAATGTCCAGGAGGGTAGTGCTTCTCAAGAGCCTGAAAATGGAGAAAGGGCATCTTATTGTTCAGAAAATAACAACACAAACAATGATGTCTCTGAGGGTAGTGCTTCTCAAGAGCCTGAAAATGGTGAAGGGGCATCTCATTGTTCAGAAAATAACAACACAAACAATGATGTCTCTGAGGGTAGTGCTTCTCAAGAGCCTGAAAATGGTGAAGGGGCATTTCATTGTTCAGAAAATAACAATACAAACAATGATGTCTCTAAGGATAGTGCTTCTCAAGAGCCTGAAAATGTTGAAGGGGCATCTCATTGTTCAGAGAATAACAATACAAACAATGATGTCTCTAAGGATAGTGCTTCTCAAGAGCCTGAAAATGGTGAAGGGGCATTTCATTGTTCAGAAAATAACAATACAAACATTGATATCTCTAAGGATAGTGCTTCTCAAGAGCCTGAAAATGTTGAAGGGACATCTCATTGTTCAGAGAATAACAATACAAACAATGACGTCTCTAAGGATAGTGCTTCTCAAGAGCCTGAAAATGTTGAAAGAGCATCTCATTGTTTAGAAAATAACACTGCAGAAATCAGAAGTGATGTTCAGAAAGACAGCAGTTCTGAAAAAGGGAATACTTCTTCCCCGAAGCGGTTTAAAAATGTTGTTGCTATTATTGATTCTCCACGTGCTGGACTTCATCCAACTGTAATCAAGGCTTTGAGAACTCATCCGGGCCTGCAGAGGCTTGTCTACATATCCTGTAATCCTGAAAGTTTGGTGGCAAATGCCATTGAGCTTTGTACGCCATCTCCGGTAGAAATTAAGAACGGAAATCCAGATTTTCGAGGATGGAAAAACATCAGCAGTGCTGGTGTAGCACGTTATAGGTCCAAGTCTATGCCCATCTCAGAGCCTTTCAAACCAGTAAAAGCTATGGCTGTTGATCTTTTTCCACATACTCCACACTGTGAATTGGTTATGCTCTTCGAGAGGTAG 2961 0.4232 MSESVAQLQTAEPLLNMDLSSSKTLNPINAQDSTPESHLTVPNEPQITPVNDDVVVGEKRKRDDGDDVSIQDNDGTNTIACIHAHTEEELVPHPEITRDTTSEPAKKVLKIEEKRSVSEDSMVIDDAFVEGSDCYGSINEFSICVVNLPKRWCNSKLRNFLKDQGVPFKHTKKKKTMGQGVIIFENAEQILSATKKLDGKMAGGRTLKVTGVIPQSFGKKKSDKENVSVDAETNDDNSKAKNVRDIVTPLAHLPYADQLEQKKSSLIPMLKKLTRNTRKACETGVSLPEWVLKSKEIAGLPCELEGIIASPIVNGYRNKCEFSVGYSMKGKVTVGFMLGDFREGVTAVEEALDCPNVSEIACKYATIFQEFLQHSDLPVWNSSTNTGFWRQLTVREGRTNGNAVGSEAFNGIAEVMLIMQVSTSGFDDAQVAAEFKRLAQAFVAGATSHSPTLPLTTLVVQDHQGISNVAPADAPLHSLPIPKAVGHPEMDEKSAAHTRIHDYISNLQFSISPTAFFQVNTLAAEKLYSLAGDWACLGPDTLLFDICCGTGTISLTLAHRVGKVVGIEMDASAVSDARRNAEINGIKNCEFICSKAEDVIGLLLKEYENVAKEQVDDPNISGSSNVVSKDSSCKEPKIGENESLQYHCSENNNTNNNVQEGSASQEPENGERASYCSENNNTNNDVSEGSASQEPENGEGASHCSENNNTNNDVSEGSASQEPENGEGAFHCSENNNTNNDVSKDSASQEPENVEGASHCSENNNTNNDVSKDSASQEPENGEGAFHCSENNNTNIDISKDSASQEPENVEGTSHCSENNNTNNDVSKDSASQEPENVERASHCLENNTAEIRSDVQKDSSSEKGNTSSPKRFKNVVAIIDSPRAGLHPTVIKALRTHPGLQRLVYISCNPESLVANAIELCTPSPVEIKNGNPDFRGWKNISSAGVARYRSKSMPISEPFKPVKAMAVDLFPHTPHCELVMLFER* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1674 986 Pfam Methyltransferase domain 543 600 IPR025714 -
Lan8g1674 986 MobiDBLite consensus disorder prediction 644 722 - -
Lan8g1674 986 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 246 986 IPR010280 GO:0006396|GO:0008173
Lan8g1674 986 PANTHER TRNA (URACIL-5-)-METHYLTRANSFERASE HOMOLOG A 80 986 - -
Lan8g1674 986 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 248 599 IPR029063 -
Lan8g1674 986 MobiDBLite consensus disorder prediction 786 831 - -
Lan8g1674 986 Pfam tRNA (Uracil-5-)-methyltransferase 872 922 IPR010280 GO:0006396|GO:0008173
Lan8g1674 986 Gene3D - 137 212 IPR012677 -
Lan8g1674 986 PANTHER TRNA (URACIL-5-)-METHYLTRANSFERASE 80 986 IPR045850 -
Lan8g1674 986 MobiDBLite consensus disorder prediction 22 47 - -
Lan8g1674 986 Gene3D - 317 517 - -
Lan8g1674 986 SUPERFAMILY RNA-binding domain, RBD 140 214 IPR035979 GO:0003676
Lan8g1674 986 CDD RRM_SF 143 209 - -
Lan8g1674 986 Gene3D Vaccinia Virus protein VP39 787 985 IPR029063 -
Lan8g1674 986 MobiDBLite consensus disorder prediction 616 870 - -
Lan8g1674 986 MobiDBLite consensus disorder prediction 22 50 - -
Lan8g1674 986 Gene3D Vaccinia Virus protein VP39 250 624 IPR029063 -
Lan8g1674 986 MobiDBLite consensus disorder prediction 616 631 - -
Lan8g1674 986 MobiDBLite consensus disorder prediction 730 778 - -
Lan8g1674 986 CDD AdoMet_MTases 545 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1674 Lan-Chr8 23671265 23676687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1674 K15332 - gmx:100777601 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1674 8 23671265 23676687 Lan13g0378 13 2546275 2551296 LSH