Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1669 ATGACTAAGGATGTTGAGGTTCATCAAGAGCAAGGTGAATACTCTGCTAAGGATTACCAGGACCCACCACCTTCACCATTGTTTGATTTAGATGAGCTGAAAAAGTGGTCCTTGTATAGAGCCATTATAGCTGAGTTCATAGCAACACTACTCTTTCTTTACATTACCATCTTGACCATTATTGGGTATAATAGCCAAACTGATACAAACAAGGGTGGTACTGAATGTGATGGAGTTGGAGTTTTGGGTATTGCTTGGTCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCTGGAGGACACATCAACCCAGCTGTAACATTTGGGTTATTCGTGGGACGCAAGATATCACTAATAAGGGCGTTCTTGTACATAGTAGCACAAAGTGCTGGTGCTATCAGTGGAGCTGGACTAGCCAAAGGGTTCCAAAAATCATACTTTGATAGGTATGGTGGTGGTGCCAACTTTGTTCATTCTGGTTACAACAAAGGCACTGCTTTGGGTGCTGAGATTATTGGTACTTTTGTTCTTGTCTACACTGTCTTTTCTGCCACTGATCCTAAGAGAAATGCTAGAGACTCCCATGTTCCTGTATTGGCACCACTACCAATTGGATTTGCTGTGTTCATGGTTCATTTGGCTACAATCCCAATTACTGGTACTGGAATTAACCCAGCAAGAAGTTTTGGATCTGCTGTCATTTACAACAAGGAGAAAATCTGGGATGACCATTGGATTTTCTGGGTTGGACCACTTATTGGAGCATTTGTAGCTGCAGTGTACCACCAATACATTCTTAGAGCAGCAGCAATCAAAGCTCTTGGTTCCTTCAGGAGCAACAATTAA 861 0.4239 MTKDVEVHQEQGEYSAKDYQDPPPSPLFDLDELKKWSLYRAIIAEFIATLLFLYITILTIIGYNSQTDTNKGGTECDGVGVLGIAWSFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKISLIRAFLYIVAQSAGAISGAGLAKGFQKSYFDRYGGGANFVHSGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGSAVIYNKEKIWDDHWIFWVGPLIGAFVAAVYHQYILRAAAIKALGSFRSNN* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1669 286 Gene3D Glycerol uptake facilitator protein. 25 286 IPR023271 -
Lan8g1669 286 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 TIGRFAM MIP: MIP family channel proteins 44 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 CDD MIP 40 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1669 286 SUPERFAMILY Aquaporin-like 32 272 IPR023271 -
Lan8g1669 286 MobiDBLite consensus disorder prediction 1 15 - -
Lan8g1669 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
Lan8g1669 286 ProSitePatterns MIP family signature. 106 114 IPR022357 -
Lan8g1669 286 MobiDBLite consensus disorder prediction 1 23 - -
Lan8g1669 286 PANTHER AQUAPORIN PIP2-7 1 285 - -
Lan8g1669 286 Pfam Major intrinsic protein 32 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1669 Lan-Chr8 23646590 23648509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1669 1 284 Major Intrinsic Protein MIP AT5G60660 77.113 1.84e-166 461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0299 7 1926687 1928674 Lan8g1669 8 23646590 23648509 LSH
Lan8g1669 8 23646590 23648509 Lan13g0379 13 2554356 2556148 LSH