Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1668 ATGACTAAGGATGTTGAGGTTCATCAAGAGCAAGGTGAATACTCTGCTAAGGATTACCAGGACCCACCACCTTCACCATTGTTTGATTTAGATGAGCTGAAAAAGTGGTCCTTGTATAGAGCCATTATAGCTGAGTTCATAGCAACACTACTCTTTCTTTACATTACCATCTTGACCATTATTGGGTATAATAGCCAAACTGATACAAACAAGGGTGGTACTGAATGTGATGGAGTTGGAGTTTTGGGTATTGCTTGGTCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCTGGAGGACACATCAACCCAGCTGTAACATTTGGGTTATTCGTGGGACGCAAGATATCACTAATAAGGGCGTTCTTGTACATAGTAGCACAAAGTGCTGGTGCTATCAGTGGAGCTGGACTAGCCAAAGGGTTCCAAAAATCATACTTTGATAGGTATGGTGGTGGTGCCAACTTTGTTCATTCTGGTTACAACAAAGGCACTGCTTTGGGTGCTGAGATTATTGGTACTTTTGTTCTTGTCTACACTGTCTTTTCTGCCACTGATCCTAAGAGAAATGCTAGAGACTCCCATGTTCCTGTATTGGCACCACTACCAATTGGATTTGCTGTGTTCATGGTTCATTTGGCTACAATCCCAATTACTGGTACTGGAATTTCTTCTTGTTCTCGACCTATGTGA 708 0.4237 MTKDVEVHQEQGEYSAKDYQDPPPSPLFDLDELKKWSLYRAIIAEFIATLLFLYITILTIIGYNSQTDTNKGGTECDGVGVLGIAWSFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKISLIRAFLYIVAQSAGAISGAGLAKGFQKSYFDRYGGGANFVHSGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGISSCSRPM* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1668 235 CDD MIP 40 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 Pfam Major intrinsic protein 32 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan8g1668 235 SUPERFAMILY Aquaporin-like 32 228 IPR023271 -
Lan8g1668 235 MobiDBLite consensus disorder prediction 1 15 - -
Lan8g1668 235 PANTHER AQUAPORIN PIP2-7 1 230 - -
Lan8g1668 235 Gene3D Glycerol uptake facilitator protein. 25 230 IPR023271 -
Lan8g1668 235 ProSitePatterns MIP family signature. 106 114 IPR022357 -
Lan8g1668 235 MobiDBLite consensus disorder prediction 1 23 - -
Lan8g1668 235 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 230 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1668 Lan-Chr8 23642836 23643954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1668 1 229 Major Intrinsic Protein MIP AT5G60660 75.546 1.55e-129 365