Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1664 ATGGCTATGGCTGTGGCTCATCACAGAGAAAGTAGCAGCAACAACAGTGGTAGCATTGATAAGCACCTTGATTCAATTTCTGGGAAATATGTAAGGTACACTGCTGAACAAGTTGAAGCTTTGGAAAGGGTTTATGCTGAGTGCCCCAAACCTAGCTCTCTTAGGAGGCAACAGTTAATCAGAGATTGCCCCAATCTTTCTAATATTGAGCCCAAGCAAATCAAGGTTTGGTTTCAGAATAGAAGGTGTAGAGAGAAGCAGAGAAAAGAAGCTTCAAGGCTTCAGACAGTGAATCGGAAACTTTCAGCAATGAACAAGTTGTTGATGGAAGAAAATGATCGGTTGCAGAAGCAGGTTTCACAGCTTGTTGGTGAGAATGGTTTTATGAGGCAGCAATTGCATACTACAACGGCAGCAACTACAGATGCTAGTTCTGATTCGGTGGTTACTACTACTCAGCATTCTATGAGAGATGCTAATAACCCTGCTGGGCTCCTATCAATTGCAGAGGAGACCTTGACAGAGTTCCTTTCCAAGGCTACAGGAACGGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCACAAAGTTGCAGTGGAGTAGCAGCTAGAGCCTGCGGTCTTGTTAGTTTAGAACCTATGAAGATTGTGGAGATCCTAAAAGATCGTTTATCTTGGTTTCGGGACTGTCGGAGCCTAGAAGTTTTCACAATGTTCCCTGCTGGAAATGGTGGGACCATTGAACTTCTTTACACACAGACATATGCTCCAACAACTCTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGAAAATGGCAGTTTTGTGGTTTGCGAGAGATCACTGTCTGGTTCTGGCACTGGCCCTAACCCAGCTGCCGCTACTCAGTTTGTGAGAGCCGAAATGCTTCCTAGTGGCTACTTGATTCGACCGTGTGAGGGTGGAGGGTCAATCATCCACATTGTGGACCACCTAAATCTTGAGGCATGGAATGTACCAGAAGTGCTACGACCTCTTTATGAATCATCAAAAGTGGTAGCTCAGAAAATGACCATTGCAGCACTTCGGTATATCAGGCAAATAGCTCAGGAAACAAGTGGTGAAGTGGTATATGGATTGGGTAGGCAGCCAGCTGTTTTGCGAACTTTCAGCCAAAGATTAAGCAGAGGCTTCAATGATGCTGTAAATGGATTCAATGATGATGGATGGACTGTAGTGAACTGTGATGGTGCTGAAGATGTAATTATTGCAGTTAATTCAGCCAAGAATCTGAATGGCACTTCTAATCCGTCAAGTTCCGTTACATTCCTTGGAGGAGTTCTCTGTGCAAAAGCTTCTATGTTGATCCAAAATGTCCCTCCTGCAGTTTTGGTTCGCTTTCTGAGGGAGCACCGCTCAGAGTGGGCTGATTTCAATGTTGATGCTTATGCTGCCGCATCACTGAAATCTGGCACCTATGCGCATCCAGGAATGAGACCTACTAGATTCACTGGCAGTCAAATAATCATGCCCCTTGGCCATACAATTGAACATGAAGAGATGCTTGAAGTTATTCGGCTTGAAGGTCACTCCCTTGCTCAGGAAGACACTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAATTGATGAGAATGACACTGGGGCTTGTTCTGAGCTCATATTTGCTCCAATCGATGAAATGTTTCCTGATGATGCTTTGTTGGTGCCTTCTGGATTTCGCGTCATTCCATTGGCTTCAAAACCAGGTGATAAAAAGGATACAATATCTACTAATCGGACTCTGGATTTGACATCTGGTCTTGAAGTGGGCCCAATGACAGCTCATGGTGCAGATGCATCATCTAGTCAAAACACTCGATCAGTGTTGACTATTGCCTTCCAGTTTCCTTTCGACAGCAATTTGCAAGATAATGTTGCTATCATGGCACGTCAATATGTTCGCAGTGTAATTTCCTCTGTGCAGAGGGTTGCCATGGCTATTTCCCCATCTGGTATAAGCCCAGGTGTTGGACCAAAATTTTCTCCTAGTACTCCAGAAGCTCTTACACTAGCTCAATGGATCTGCCAGAGTTACAGTTACCATTTGGGAGCAGATTTACTGAGATCAGATTCTCTTGTTGGTGACTTGATGCTGAAACATCTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCAGTGAAGTCGCTGCCGGTGTTCATCTTTGCAAATCAAGCTGGCCTTGACATGCTAGAAACAACTCTAGTAGCTTTACAAGACATCACATTGGATAAAATATTTGACGAGTCTGGACGCAAGACATTGTGTGCAGACTTTGCCAAGTTAATGCAGCAAGGGTCTGCTTATTTGCCAGCTGGGATCTGCATGTCGACGATGGGCCGACATGTTTCATATGAACAAGCCATAGCATGGAAAGTGTTTAATGCCGAAGATAACGATGTTCATTGCTTGGCTTTTTCCTTCATAAACTGGTCATTTGTATGA 2541 0.4451 MAMAVAHHRESSSNNSGSIDKHLDSISGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRDCPNLSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVGENGFMRQQLHTTTAATTDASSDSVVTTTQHSMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPMKIVEILKDRLSWFRDCRSLEVFTMFPAGNGGTIELLYTQTYAPTTLAPARDFWTLRYTTTLENGSFVVCERSLSGSGTGPNPAAATQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVVNCDGAEDVIIAVNSAKNLNGTSNPSSSVTFLGGVLCAKASMLIQNVPPAVLVRFLREHRSEWADFNVDAYAAASLKSGTYAHPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDTFVSRDIHLLQICSGIDENDTGACSELIFAPIDEMFPDDALLVPSGFRVIPLASKPGDKKDTISTNRTLDLTSGLEVGPMTAHGADASSSQNTRSVLTIAFQFPFDSNLQDNVAIMARQYVRSVISSVQRVAMAISPSGISPGVGPKFSPSTPEALTLAQWICQSYSYHLGADLLRSDSLVGDLMLKHLWHHQDAILCCSVKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKTLCADFAKLMQQGSAYLPAGICMSTMGRHVSYEQAIAWKVFNAEDNDVHCLAFSFINWSFV* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1664 846 Pfam Homeodomain 29 87 IPR001356 GO:0003677
Lan8g1664 846 Gene3D - 203 383 IPR023393 -
Lan8g1664 846 SUPERFAMILY Homeodomain-like 28 91 IPR009057 -
Lan8g1664 846 SMART START_1 167 377 IPR002913 GO:0008289
Lan8g1664 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 846 - -
Lan8g1664 846 SMART HOX_1 26 92 IPR001356 GO:0003677
Lan8g1664 846 CDD START_ArGLABRA2_like 162 378 - -
Lan8g1664 846 Coils Coil 94 125 - -
Lan8g1664 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 846 IPR044830 GO:0003700
Lan8g1664 846 Pfam MEKHLA domain 702 845 IPR013978 -
Lan8g1664 846 Pfam START domain 168 375 IPR002913 GO:0008289
Lan8g1664 846 ProSiteProfiles 'Homeobox' domain profile. 24 88 IPR001356 GO:0003677
Lan8g1664 846 CDD bZIP 81 120 - -
Lan8g1664 846 ProSiteProfiles START domain profile. 158 386 IPR002913 GO:0008289
Lan8g1664 846 MobiDBLite consensus disorder prediction 1 21 - -
Lan8g1664 846 CDD homeodomain 29 89 IPR001356 GO:0003677
Lan8g1664 846 Gene3D - 23 95 - -
Lan8g1664 846 SUPERFAMILY Bet v1-like 167 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1664 Lan-Chr8 23606522 23613292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1664 1 846 Homeobox Transcription Factor Family AT5G60690 80.986 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan8g1664 START 1.3e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1664 K09338 - gmx:100804870 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0302 7 1950330 1957474 Lan8g1664 8 23606522 23613292 LSH