Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1654 ATGATCAATAGAGATATAAGGAAGGTGGTTGCTTTTGTTGAAATTGTTGTTATATTGAGCTGCATTGTGGGGCTATTGCAAGTTTCATGTCAGAACAACAATGATGATGGTGGTGGTGGTGGTGGCGGTGCTGGGATTCAGATTTTGGCCCAGGAATTATACCGTGCTAGCATGGCCAACATCACCAAGGTCTTGAAAGCCACAATAAAAGAAGAGTTGGGTTTTTGCATAGTTGATGTGGACGCAGATTGGGATGGGGCGTTCAATTTCACCAAAGATCTGAGTTTTTTGACCATGTGTTCCCAGAAATTAAAGGGTGATATCACACAGCGTATTTGCACGGCAGCAGAAATAGAAGCCTATGCTCGAAGTTTTACAACCGAAACCAAATCCGCCTTTCTGAAGCCTAACATAAACTGTAATATGAGTTCGTGGCTGAACGGATGTGAGCCCGGGTGGGCCTGTAAAGCTAATCAGAAAGTAGAGGTAAACAATAACAAGAAGGAGATACCTGTTAGATCTATTGATTGCCAACCTTGTTGTGAAGGTTTCTTCTGCCCTCATGGTATCACCTGCATGATACCCTGCCCATTAGGCTCTTACTGTCCACGTGCCGAACTCAATAAAACTAGTGGAGTATGTGAACCATATCGGTATCAGATACCTCCTGGAAAGTTTAACCATACTTGTGGAGGAGCAGATATTTGGGCAGACATTACTAGTAGTGCAGATGTATTCTGTTCATCAGGATCATTCTGCCCATCAACTATAATAAAAAATCCTTGCAATAAAGGGTTTTACTGCAGAACAGGTTCTACTGCCCAAGAGCGATGTTTCAGATTGGCTAGCTGTGAGCCTAAATCAGCAAATCAGAATATTACTGCATATGGTGTCCTGGTTTTTGCTGGCTTGTGTTTCATGCTTATTATCATATATAACTGTTCGGATCAAGTACTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCTCAAAGTGTTCGAGAAACACAAGCACGTGAAAAATGGAAATCTGCAAAAGATATTGCTAAGAAACATGCTACTGAACTTCAGTCACAATTGTCGCGTACTTTTTCTCGCAAAAAATCTACAAAGACCCCAGAATTCAAAGGTGTCTTACCACCAATGGTTGGTACGTCAAAAGCAAAGAAAAAGGATAAAAACGACCTCTCAAAAATAATAAATGAAATCGAGGAAAACCCTGATAGTCAAGAAGGGTTTAATGTTCAGATAGGAGATAAAAATATGAAAAAAGCACCAAGGGGTAAACAATTGCATACTCAAAGCCAAATGTTCAGGTATGCATATGGTCAGATTGAAAAAGAAAAGGCCTTACAGGAACAAAATAAGAACTTGACCTTCTCTGGAGTTATTTCTATGGCTAGTGATATTGAGATAAGGAAGAGGCCTACAATTGAGGTTGCTTTTAAGGACTTAACTCTCACTTTGAAAGGTAAAAACAAACATCTATTAAGAAGTGTGACAGGGAAATTATATCCTGGAAGAGTTTCGGCAGTCATGGGTCCTTCCGGGGCTGGTAAGACAACATTTCTTTCTGCCTTAACCGGAAAAGCAACTGGATGTCACACAACTGGCCAAGTTCTTGTAAATGGCCAGGAATCATCTATTACATCATACAAGAAGATCATTGGTTTTGTTCCACAAGATGATATTGTGCATGGAAATTTGACTGTGGAGGAGAATCTGTGGTTCAGTGCTAGATGCAGACTCTCTGCTGATTTACCAAAAGAAGAGAAGGTTTTGGTGGTTGAAAGAGTCATTGAGGCCTTGGGTTTGCAGGCAATAAGGGATTCTCTGGTTGGGACAGTGGAGAGGCGAGGAATATCGGGAGGTCAAAGGAAGAGAGTAAATGTTGGACTTGAAATGGTTATGGAACCTTCACTTTTAATTTTAGATGAACCTACATCTGGTTTGGATAGCTCATCTTCTCAGTTACTTCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGAGTAAACATATGTATGGTCCTTCATCAACCAAGTTACACCTTGTTCAGGATGTTTGATGATTTTATACTACTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTGGAAGAGTACTTTTCCAGTATAGGAATTGTTGTCCCTGACAGAGTGAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATAGTAAAACTACCAGAAAGTTCAGGAGTGAACTATAAACAACTACCTGTTAGATGGATGCTTCATAACGGGTACCCCGTGCCGATGGATATGCTAGCAACTGTTGAAGGAATGGCAACCCCTGGTGAAGGTTCTGCACATGGAGCTGCTGCTACAACAGGGAATGCTGATGACACTTCCTTTGCTGGAGAGCTTTGGCAGGATGTGAAGTGCAATGTTGAGCTCAAGAAGGACAATCTTCAACACAACTTTTTAAATTATTCGCGTGATTTGTCTAATCGGGAAACGCCTGGAACATTCACACAGTACAAATACTTCCTTGGAAGAGTCGGAAAGCAAAGGTTAAGAGAAGCTAGAACACAAGCTGTAGATTTTCTAATTTTGCTACTAGCTGGCCTCTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCGTTCGGATCAACCGGTTATACATACACTGTAATAGCAGTATCACTCCTTTCAAAGATTGCTGCTTTGAGATCCTTCTCATTGGATAAGTTGCACTATTGGAGGGAGAGTGCTTCAGGCATGAGTAGTTTGGCTTACTTTCTTTCGAAGGATACGGTCGATCATTTCAGTACAATTATCAAACCTCTGGTTTATCTATCTATGTTCTATTTCTTCAACAATCCAAGATCATCAGTCACAGATAATTACATGGTTCTGCTGTGTTTGGTGTATTGTGTCACCGGCGTAGCTTATGTATTAGCAATCTTCCTTCAACCTGGTCCTGCGCAATTGTGGTCAGTGTTACTTCCTGTAGTTTTGACTCTAGTAGCAACCTATGATAATCAAGAAGATAGCAAATATGTGCGGTTTCTATCCGACTTGTGCTACACGAAATGGGCTCTCGAGGCATTCGTAATATCAAATGCGAAAAGATATGCTGGAGTTTGGTTAATAAGCAGATGTGGTGCACTCTATGCAAGTGGCTATGATCTGAACCATTGGTATCAATGTTTAGGCCTTCTTATATTAACAGGAATTATTAGCCGCATGCTTGCATTCTTTTGTATGATAACATTCCAAAAGAAATAG 3282 0.408 MINRDIRKVVAFVEIVVILSCIVGLLQVSCQNNNDDGGGGGGGAGIQILAQELYRASMANITKVLKATIKEELGFCIVDVDADWDGAFNFTKDLSFLTMCSQKLKGDITQRICTAAEIEAYARSFTTETKSAFLKPNINCNMSSWLNGCEPGWACKANQKVEVNNNKKEIPVRSIDCQPCCEGFFCPHGITCMIPCPLGSYCPRAELNKTSGVCEPYRYQIPPGKFNHTCGGADIWADITSSADVFCSSGSFCPSTIIKNPCNKGFYCRTGSTAQERCFRLASCEPKSANQNITAYGVLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAQSVRETQAREKWKSAKDIAKKHATELQSQLSRTFSRKKSTKTPEFKGVLPPMVGTSKAKKKDKNDLSKIINEIEENPDSQEGFNVQIGDKNMKKAPRGKQLHTQSQMFRYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESSITSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIEALGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSSIGIVVPDRVNPPDYYIDILEGIVKLPESSGVNYKQLPVRWMLHNGYPVPMDMLATVEGMATPGEGSAHGAAATTGNADDTSFAGELWQDVKCNVELKKDNLQHNFLNYSRDLSNRETPGTFTQYKYFLGRVGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDESFGSTGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSVTDNYMVLLCLVYCVTGVAYVLAIFLQPGPAQLWSVLLPVVLTLVATYDNQEDSKYVRFLSDLCYTKWALEAFVISNAKRYAGVWLISRCGALYASGYDLNHWYQCLGLLILTGIISRMLAFFCMITFQKK* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1654 1093 MobiDBLite consensus disorder prediction 328 395 - -
Lan8g1654 1093 Coils Coil 390 410 - -
Lan8g1654 1093 Pfam ABC transporter 501 653 IPR003439 GO:0005524
Lan8g1654 1093 SMART AAA_5 510 711 IPR003593 -
Lan8g1654 1093 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 44 1089 - -
Lan8g1654 1093 CDD ABCG_EPDR 482 708 - -
Lan8g1654 1093 MobiDBLite consensus disorder prediction 328 357 - -
Lan8g1654 1093 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 484 725 IPR003439 GO:0005524
Lan8g1654 1093 ProSitePatterns ABC transporters family signature. 625 639 IPR017871 GO:0005524
Lan8g1654 1093 Gene3D - 473 720 IPR027417 -
Lan8g1654 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 723 IPR027417 -
Lan8g1654 1093 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 1089 - -
Lan8g1654 1093 Pfam ABC-2 type transporter 682 1093 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1654 Lan-Chr8 23505526 23514131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1654 511 704 Calmodulin-binding Proteins AT2G36910 30.000 8.34e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1654 - - gmx:100794093 1825.83