Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1649 ATGCAGAGATCAGGTTATGGCCGTGACGGAATATATAGATCACTAAGACCTTCTCTTATTCTACCTAAAGATCCCAACCTCTCTCTCGTCTCTTTCTTATTTTCATCTTTCTCTTCTTTCTCTAACAAAACTGCACTCGTTGATGCTGACTCATCTGAATCTCTTACCTATGCACAACTCAAAAGCAAAGTCATCAAAATCGCTCATGGGTTTCACCACCACCTTAGTATCAACAAAAACGATGTTGTTCTTTTGTTTGCCCCCAACAGCATCAACTTCCCTATATGTTTTCTCGCTGCTGCATCCATTGGCGCTGTTGTTTCAACCGTTAACCCTATCTACACCGTTGCTGAGATCTCTAAGCAGGTTAAAGATTCTAACCCAAAGCTCATAATTACAGTTCCTGAGTTATGGGACAAGGTGAAGGGTTTCAACCTTCCTATACTAAGTCTTGGTACGAAAACAAAAAACATGGTTTCGAGTGTAAAGATCACAACTTTGAACGAGTTAATCAATATGGTAGGTTCTCCAACGGAGTTACCAGTAAAGGATGTGAAACAAAGCGATACGGCGTCGCTTTTGTACTCTTCTGGAACAACGGGTGTGAGTAAAGGTGTGGTTTTGACGCATGGGAATTATATTGCAGCTTCTTTGATGATTGGAATGGATGAGGATTTGGTTGGAGAGGAAGATAACGTGTACCTTTGTGTTTTGCCGATGTTTCATGTGTTTGGGCTTGCGGTGATTACTTACTCGGTTCTTACAAGAGGGAATAAGTTAGTGTCGTTGGGTAGGTTTGATTTTGAAGTGTTTTTGAAAACGATTGAGAAATATAAGGTGACGAATTTGTGGGTTGTGCCTCCTATTGTTCTTGCTCTGGCGAAACAAAGTGTGGTTAAGAATTATGATTTATCTTCGTTGAAGCGAATTGGATCTGGTGCTGCTCCTCTTGGGAAAGATTTGATGGAGGGGGTTTCTAAGCGTTTTCCTCATGCTACTATTGCTCAGGGCTATGGTATGACAGAAACTACTGGTATTGTTTCTGTGGAGAATCCAAGAGTAGGGATTCGACATTCTGGTTCAACAGGAATGCTAGTTTCAGGAGTTGAAGCTCAAATAGTCAGTGTGGATACACAGAAGCCTCTCCCTCCTAGAGAGATGGGAGAAATATGGGTACGGGGTGCTAATATGATGCAAGGTTATTATAACAATCCACAGGCCACACAATCAACTATAGATAAAAATGGGTGGGTGCATACTGGAGATCTTGGATATTTTGATGAGGATGGGCACCTTTTCGTAGTTGACCGGATCAAAGAACTGATCAAATATAAGGGTCTTCAGGTTGCACCAGCAGAACTAGAAGGGCTTCTCATTTCTCACCCTGAGATACTAGATGCTGTTGTCGTCCCATATCCGGATGATGAAGCTGGCGAGGTTCCAATCGCCTATGTCGTTCGTTCACCCAACAGCTCACTAACTGGAGATCAAATTAAGAAATTTATTGCTGATCAGGTTGCACCTTTCAAAAGATTGAGAAGGGTAACATTCATCAACAGTATTCCTAAGACAACTTCAGGAAAAATTCTCAGAAGAGAGCTCACTGATAAAGCACGATCTAAAATATAA 1629 0.4156 MQRSGYGRDGIYRSLRPSLILPKDPNLSLVSFLFSSFSSFSNKTALVDADSSESLTYAQLKSKVIKIAHGFHHHLSINKNDVVLLFAPNSINFPICFLAAASIGAVVSTVNPIYTVAEISKQVKDSNPKLIITVPELWDKVKGFNLPILSLGTKTKNMVSSVKITTLNELINMVGSPTELPVKDVKQSDTASLLYSSGTTGVSKGVVLTHGNYIAASLMIGMDEDLVGEEDNVYLCVLPMFHVFGLAVITYSVLTRGNKLVSLGRFDFEVFLKTIEKYKVTNLWVVPPIVLALAKQSVVKNYDLSSLKRIGSGAAPLGKDLMEGVSKRFPHATIAQGYGMTETTGIVSVENPRVGIRHSGSTGMLVSGVEAQIVSVDTQKPLPPREMGEIWVRGANMMQGYYNNPQATQSTIDKNGWVHTGDLGYFDEDGHLFVVDRIKELIKYKGLQVAPAELEGLLISHPEILDAVVVPYPDDEAGEVPIAYVVRSPNSSLTGDQIKKFIADQVAPFKRLRRVTFINSIPKTTSGKILRRELTDKARSKI* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1649 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 541 - -
Lan8g1649 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Lan8g1649 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 541 - -
Lan8g1649 542 SUPERFAMILY Acetyl-CoA synthetase-like 22 540 - -
Lan8g1649 542 Gene3D - 440 541 IPR045851 -
Lan8g1649 542 Gene3D - 10 439 IPR042099 -
Lan8g1649 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Lan8g1649 542 CDD 4CL 43 534 - -
Lan8g1649 542 Pfam AMP-binding enzyme 39 444 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1649 Lan-Chr8 23464944 23468706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1649 1 542 Monolignol Biosynthesis Gene Families AT4G05160 67.339 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1649 K01904 - gmx:100808944 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0094 3 654557 658274 Lan8g1649 8 23464944 23468706 PCT
Lan8g1649 8 23464944 23468706 Lan3g0094 3 654557 658274 PCT