Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1634 ATGGGTCAGATCCAGTACTCTGAAAAATACTTTGATGATACTAATGAGTATAGGCACGTGGTTCTGCCTCCTGAAGTCGCAAAACTGCTCCCAAAGAATCGTCTTCTCTCTGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGCCGTGGTTGGGTTCACTATGCAATTCATCGCCCAGAGCCACACATAATGCTTTTCAGGAGGCCTTTGAATTTTCAGCAGTAG 228 0.4561 MGQIQYSEKYFDDTNEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQ* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1634 75 SMART CKS_2 3 72 IPR000789 GO:0016538
Lan8g1634 75 SUPERFAMILY Cell cycle regulatory proteins 1 74 IPR036858 GO:0016538
Lan8g1634 75 Gene3D - 1 75 IPR036858 GO:0016538
Lan8g1634 75 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 75 - -
Lan8g1634 75 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Lan8g1634 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Lan8g1634 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Lan8g1634 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Lan8g1634 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Lan8g1634 75 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1634 Lan-Chr8 23334041 23335394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1634 1 75 Core Cell Cycle Gene Families AT2G27970 93.333 2.62e-50 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1634 K02219 - dcr:108218560 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0330 7 2217587 2218822 Lan8g1634 8 23334041 23335394 LSH
Lan8g1634 8 23334041 23335394 Lan13g0410 13 2818971 2820232 LSH