Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1633 ATGGCGATTGCGAGTCTACACAATGTGTCTGTACTTGATTCTTCTTTCCTCAGGGAATCCCATTCTCAGCCATCTAGAAGGCGAGGAGATGGAAGGTTAGGAAGCACCCGAGCATCATCGCTCTTGCGGATGTGGCGAGAGATTGAGGATGAACACCTGGCGAGACAATTTCAAGGAAGGCCTGGTGAAGTATTACTTGAGCAAAGGAGTGATGGGTTGATTGATGACCTTTCACATGCAGGTACACCACATAGCAATGAGAGTGGGCGAGCACATTTGCTAGAAGAGGCAGTTTTGGCTGCTAATGAGTCTGAAATATGGGCACAGTCACAAAGTCAGAATGTACCCCATGATGATCAAGAGGATTTAAACAATTCTAGCTGCGAAAACTTTTATGATTTGGGAGAAATTGAAAGGGAAAGAGTGAGGCGGATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGAGCATGGGTTGAACATTTCCCGAAGAAATAACAATCCCAGGGGAGAATGGCTTGGTCAAACTGAGCAGGAAAGGGTGAGAGTCATAAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGTGATGGTTCTTCTGGAGATTATAGGGAAGAACAATATGCTGAAATTGATACACAAATTGAACGTGTTCGTGACGGATTTGTTCTTAACCAGAGTGAGGGCCAAACACAGCATACCCGGAGAGGTATTCGTAAATTACGTGGTCGACAGGTTATGCTTGATATGCTTAAGAAGTCTGAGAGGGAAAGGCAAAGAGAAATTCAGGAGTTGCTGGACCATCAGCCTGTATCTCATTTTCCCCATCGTAATCGTATACAGGCATTGCTCAGAGGAAGGTTCTTGAGAAATAATAGATGTGGTGACATTAACAGGTCCGCTTCCATCGCACAAAGTGAATTAGGCTTACTGAGGCAAAGACAAAGTGTATCAGGCCTACGAGAGGGATTCTTCTCTAGAAAGGACAATACTGATTGCAATCAAGCAACAAACAACCTATCAGTTACCCCATCTAGTAGTGCTACCAATTTTAATACAATTGAACAAACAGGAGCCAGCAGTTCACATCTGGTCCCAACTGTACAATCTGAACCTAATTTGAGAGGAAGTGATGGACATCACATAGCAGGTGACTGGAATTGCATGCAAGGAGTCACATTTGAAAATTTAGATACACAAATATCTACTCTTCATGCAGGAGATCAGTTGCAGTGTACGGAAATTGATTCACTAGATTCGCAACCATCACCATGTCTTGTTGTTGGAAGAAGAGACAACACCGGGCAAAATGTTGATGTGATGCCAACCATGGCTACTTCTAACGAACTTACCCAAGAAAGTTTGCAAATCGAAGATTCAGAGAATAGTGATCTGCTGGAATTCTACGAGGCTTCTAACGAGCAATCTGAGCTGGGTGATATAAATAATGGTGAAAACAATCATATGGACGGCAATATTGTTGATGATATGAATTGGAGTGAATCCAATGCACTGCAAGGAGATGAATTGGAAGAAGTTATTGACAGCGAAGGAAGTGACTGGCATCAGAGTAACGCCTATTGGAGCAATATCACTGAGGAAAATGTGGATGATAATCATCTCAGTAGTACAGCCAGCGAGTGGCATGAAAACAGTTTGAGAAATGAAGATGGAGATAACTCTCGTCTGCCAGAAGCTCCTGAAGTGTGGCAAGAAGATGGTAGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCTTCTGATCATGAAGGTGCTCCTGTTCGTAGAATTCCTGAACTTTATTTTCCCGATGATGACAATGTGTACAGTGGTGAACTTAGGGAACTGCTTAGTAGAAGAAGTGTCTCTAACCTTCTCCATAGCAGTTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAACGGCAAGGTAATGCTCTTGATGAGTTGGAGCTGCAAGAAACAACCCTTTCTTCTGCCTCAGTAGAAGAGGAACTTGAACAACAGAGTAGGGATCAGATTGTTGGTGAGGAGGGTATTGTTAATAGTCCACTTGACCTACCCTCTTTACCGATACCTCCTCCTTTGCCTCATTGGGACCAACATCATCATCGTGACAATTGGTCACAGAATGACGTAAATAATCAGCTTCTAGGCATGGATTGGGAGGTTATTAATGACTTGAGACTTGACATGGCTAGAATGCAGCAAAGGATGAATACTATGCAGAAAATGCTGGAGACCTGTATGGATATGCAGCTGGAGTTGCAGCGCTCAATTAGACAAGAAGTTTCTGCAGCCCTAAATCGCTCAGCTGGCTCATCAGGAACAAATGTCTTTGAGACACCGTATGATGAATCTAAATTGGAATGTGTGAGAAAAGGGCTTTGTTGTATATGCTGCGAAAGCAGTATTGATTCATTGTTGTACAGATGTGGGCACTTGTGTACATGTTCAAATTGTGCCAACGAGTTGTTAGAAAGTCGATGGAAGTGCCCAATGTGTCAAGAGCCTGTGGTGGAGGTGATACGCACATATTCTTTACTGTAA 2556 0.4339 MAIASLHNVSVLDSSFLRESHSQPSRRRGDGRLGSTRASSLLRMWREIEDEHLARQFQGRPGEVLLEQRSDGLIDDLSHAGTPHSNESGRAHLLEEAVLAANESEIWAQSQSQNVPHDDQEDLNNSSCENFYDLGEIERERVRRIFREWMNSGAREHGLNISRRNNNPRGEWLGQTEQERVRVIREWVQMSSQQSDGSSGDYREEQYAEIDTQIERVRDGFVLNQSEGQTQHTRRGIRKLRGRQVMLDMLKKSERERQREIQELLDHQPVSHFPHRNRIQALLRGRFLRNNRCGDINRSASIAQSELGLLRQRQSVSGLREGFFSRKDNTDCNQATNNLSVTPSSSATNFNTIEQTGASSSHLVPTVQSEPNLRGSDGHHIAGDWNCMQGVTFENLDTQISTLHAGDQLQCTEIDSLDSQPSPCLVVGRRDNTGQNVDVMPTMATSNELTQESLQIEDSENSDLLEFYEASNEQSELGDINNGENNHMDGNIVDDMNWSESNALQGDELEEVIDSEGSDWHQSNAYWSNITEENVDDNHLSSTASEWHENSLRNEDGDNSRLPEAPEVWQEDGSFQEAVENWLGGPSDHEGAPVRRIPELYFPDDDNVYSGELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQGNALDELELQETTLSSASVEEELEQQSRDQIVGEEGIVNSPLDLPSLPIPPPLPHWDQHHHRDNWSQNDVNNQLLGMDWEVINDLRLDMARMQQRMNTMQKMLETCMDMQLELQRSIRQEVSAALNRSAGSSGTNVFETPYDESKLECVRKGLCCICCESSIDSLLYRCGHLCTCSNCANELLESRWKCPMCQEPVVEVIRTYSLL* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1633 851 ProSiteProfiles Zinc finger RING-type profile. 799 838 IPR001841 -
Lan8g1633 851 Coils Coil 727 747 - -
Lan8g1633 851 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 850 - -
Lan8g1633 851 PANTHER PROTEIN, PUTATIVE-RELATED 1 850 - -
Lan8g1633 851 SUPERFAMILY RING/U-box 798 845 - -
Lan8g1633 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 778 849 IPR013083 -
Lan8g1633 851 MobiDBLite consensus disorder prediction 108 127 - -
Lan8g1633 851 Pfam Zinc finger, C3HC4 type (RING finger) 796 843 - -
Lan8g1633 851 CDD mRING-HC-C3HC5_NEU1 799 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1633 Lan-Chr8 23311401 23316980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1633 799 845 C3H Transcription Factor Family AT3G06140 42.553 6.43e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1633 - - lang:109351692 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0332 7 2251451 2255911 Lan8g1633 8 23311401 23316980 LSH
Lan6g1910 6 30082213 30087443 Lan8g1633 8 23311401 23316980 PCT
Lan8g1633 8 23311401 23316980 Lan6g1910 6 30082213 30087443 PCT