Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1632 ATGATTCTGATTTTTCAACCAGAACCCATAAACACACTATCTCTGATATCCTCAGAAAACAAAAGAAACATGGAATTGTACTACAACCGCAGAATTCTGTTACTAAACGAGGATTTACCTTACTACTACTCCTACTCCACATCCATAACCCCTGACATTGAACCACCCACCACCACCACCACCGCCGCCGCCGCCAACGGAAGTGCTTCGCAACTTCCACCTCGTCCAATTTTCAATTTCGGCGTTGCCTATTACCTCATTATCATCTTATCATTCCTTTTATTCCTCACCTTCTTCATCTTGTACATGCGTCGAGATCATTCATTGTCTCATCATCCTCCACGCAATGAGCGCGTGGTCCCCACCGCCTCCATTACTATTCCGGCGCAGCAAGTGGAGGATTGTGTGATATGTTTGGAGGAGTTCAGGGAAGGTGAGAATGTGAAGATGATTCTGTGCTGCAAGCACGTGTTTCACCCTCATTGTATTGACACGTGGCTCGATAAGCACGTGACGTGTCCCGTTTGCAGGTGCAATAAGTTCAGCGAAGTGAAAGTGGCAGATGAAAATGGAGTTGGAACAGAATGA 588 0.4609 MILIFQPEPINTLSLISSENKRNMELYYNRRILLLNEDLPYYYSYSTSITPDIEPPTTTTTAAAANGSASQLPPRPIFNFGVAYYLIIILSFLLFLTFFILYMRRDHSLSHHPPRNERVVPTASITIPAQQVEDCVICLEEFREGENVKMILCCKHVFHPHCIDTWLDKHVTCPVCRCNKFSEVKVADENGVGTE* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1632 195 PANTHER RING-H2 FINGER PROTEIN ATL57 59 181 - -
Lan8g1632 195 CDD RING-H2_PA-TM-RING 134 177 - -
Lan8g1632 195 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Lan8g1632 195 PANTHER RING FINGER DOMAIN-CONTAINING 59 181 - -
Lan8g1632 195 Pfam Ring finger domain 134 177 IPR001841 -
Lan8g1632 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 182 IPR013083 -
Lan8g1632 195 SMART ring_2 135 176 IPR001841 -
Lan8g1632 195 SUPERFAMILY RING/U-box 134 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1632 Lan-Chr8 23308103 23308940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1632 63 184 Rapid Response to Elicitors AT3G05200 33.333 4.48e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1632 - - lang:109354071 349.362