Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan8g1623 | ATGGCTGGACCAATGGAGTTTTGGGGCGTTGAGGTAAAGGTAGGACAAGCGGTTAAAGTTGACAGAAATGATCTACTTGGCGAAACCATTCACCTTTCTCAAATTGCGTTGGGCGAGTCAAAGAAAGACAAAGCAAATGAACCTGTGGTTCTGTATTTGAAAGTTGGTGAACGAAAGTTTGTTTTGGGAACATTGATTAGGAATGATATTCCTCAACTCTCTGTAGATTTATTTCTGCACTCGGAGTTTGAGCTTTCGCATAATTCGAAAAATTCGAGTGTTTATTTTAGTGGATACAAAGTTGAAAATGACTTTAATAGTGTTTCTGACTTTTCTGATAGTGATGAAGATCTACCGATTTTGAACAAAGATGATGGAAAACTTGAAAAAAATGGTGACGATATAAAGGTTGTTGAATCTAAGAGACCTCCAGTCTCAATTGGTGCATCTGCAAAACAAGCCAAGATTGCTGTTCCAAAGAAAGATGAAGCAGATGAATCTGATGACGACGACGATTCTGATGACGAAGATGATTTTGGAAGCTCTGATGAGATGGATGATGATAGTGATATTGATGATGATAGTGACAGTGATGAAGATGAAGATGAATCTGAAGATGATGAAGAGACCCCTCTTAAGAAGGTGGATCAGGGCAAGAAGAGACCCAATGGATCTGCATCCAAAAATCCAGTTTCTATCAAGAAAGCTAAAAATGCTACTCCTGAGAACAACGGTGGTAAGAAAAGCTTGCATACAGCTTCTCCTCACCCTGTGAAGAAGGGTGGAAAGAATTCCAACAAGAAAGGACAACGCTCCTAA | 819 | 0.3944 | MAGPMEFWGVEVKVGQAVKVDRNDLLGETIHLSQIALGESKKDKANEPVVLYLKVGERKFVLGTLIRNDIPQLSVDLFLHSEFELSHNSKNSSVYFSGYKVENDFNSVSDFSDSDEDLPILNKDDGKLEKNGDDIKVVESKRPPVSIGASAKQAKIAVPKKDEADESDDDDDSDDEDDFGSSDEMDDDSDIDDDSDSDEDEDESEDDEETPLKKVDQGKKRPNGSASKNPVSIKKAKNATPENNGGKKSLHTASPHPVKKGGKNSNKKGQRS* | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan8g1623 | 272 | MobiDBLite | consensus disorder prediction | 111 | 130 | - | - | |
Lan8g1623 | 272 | Gene3D | Nucleoplasmin core domain | 3 | 106 | - | - | |
Lan8g1623 | 272 | PANTHER | 32 KDA HEAT SHOCK PROTEIN-RELATED | 5 | 268 | - | - | |
Lan8g1623 | 272 | MobiDBLite | consensus disorder prediction | 116 | 130 | - | - | |
Lan8g1623 | 272 | MobiDBLite | consensus disorder prediction | 139 | 272 | - | - | |
Lan8g1623 | 272 | MobiDBLite | consensus disorder prediction | 164 | 209 | - | - | |
Lan8g1623 | 272 | PANTHER | HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 | 5 | 268 | - | - | |
Lan8g1623 | 272 | MobiDBLite | consensus disorder prediction | 222 | 250 | - | - | |
Lan8g1623 | 272 | Pfam | Nucleoplasmin-like domain | 7 | 100 | IPR041232 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan8g1623 | Lan-Chr8 | 23199974 | 23202386 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan8g1623 | 5 | 265 | C2H2 Transcription Factor Family | AT5G03740 | 37.276 | 8.71e-33 | 120 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan7g0343 | 7 | 2352254 | 2355423 | Lan8g1623 | 8 | 23199974 | 23202386 | LSH | |
Lan6g2032 | 6 | 31074413 | 31077149 | Lan8g1623 | 8 | 23199974 | 23202386 | PCT | |
Lan10g0163 | 10 | 1065766 | 1068531 | Lan8g1623 | 8 | 23199974 | 23202386 | PCT | |
Lan3g0116 | 3 | 807707 | 811695 | Lan8g1623 | 8 | 23199974 | 23202386 | PCT | |
Lan8g1623 | 8 | 23199974 | 23202386 | Lan6g2032 | 6 | 31074413 | 31077149 | PCT | |
Lan8g1623 | 8 | 23199974 | 23202386 | Lan10g0163 | 10 | 1065766 | 1068531 | PCT | |
Lan8g1623 | 8 | 23199974 | 23202386 | Lan3g0116 | 3 | 807707 | 811695 | PCT |