Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1621 ATGAGATTGGAGAAATGCTGGTTCTGTTCTTCAACGGTATACCCTGGACATGGAATCCAATTTGTTCGTAATGATGCTAAGATTTTTCGATTTTGTAGATCCAAGTGTCACAAGAACTTTAAAATGAAGAGAAACCCTCGGAAAGTAAAATGGACTAAGGCATATAGGCGGGTGCATGGAAAGGATATGACACAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAGAGATATGACAGGAATCTTACTGAGAATGTTCTCAAGGCCATTCCTAAGATTGATAAGATCAGAGTCGGCAGGGAGGAGAGACACCATAAGAATAGGATGAAAGGCAAGAAGCAGAAGCTGCAGATGGAGGCAGCTAAGGAATTGGAGCAGAGCATCAGTTTGGTCAAAGCTCCTTCTGTTTTTCAACAGGATCAGTCTCTCACTCTACCAAAGATTGTGGTCAGTGTTTCCCAACAACAATCGGAGAATCGCATGGAAGAGTGA 501 0.4271 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVGREERHHKNRMKGKKQKLQMEAAKELEQSISLVKAPSVFQQDQSLTLPKIVVSVSQQQSENRMEE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1621 166 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Lan8g1621 166 SMART 4TRASH 6 44 IPR011017 -
Lan8g1621 166 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Lan8g1621 166 PANTHER 60S RIBOSOMAL PROTEIN L24 1 166 IPR000988 -
Lan8g1621 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Lan8g1621 166 PANTHER BNAA04G10330D PROTEIN 1 166 - -
Lan8g1621 166 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Lan8g1621 166 Coils Coil 109 129 - -
Lan8g1621 166 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1621 Lan-Chr8 23184730 23186781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1621 1 160 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.375 3.14e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1621 K02896 - gmx:100793564 313.538