Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1615 ATGAGGACACTGTACACTGATGCAACAAACTTCACTAATTTACGAGTTTGCCACTATTCCCAATTCCTCTCTCCAAACCCAAACACACTATCTCTTGTTCCTTCTTCCTCCAAAATTCCACACCTTACTTCTATTTCATCTAAAAAACAACGTTTCTATTCTTCTTCTTTTTCTTCATTGATTCGATCGTCAATGGCGTCTTCTCTTCCAACCTCATCATCCATTGATACAAAACCATTTTCTGTGCTCTTTGTGTGCTTAGGCAACATATGCAGAAGCCCAGCTGCTGAAGGAGTTTTCACTGATTTGGTTAAGAAAAGGGGTTTTGATTCTAACTTCAAAATCGATTCTGCTGGTACCATCGATTACCACGAGGGGAATGAAGCGGATCAGAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTAAGATAACTTCTATTTCGAGACCAATTAGGCCTTCTGATTTTGTTGATTTTGATCTCATTCTTGCCATGGACAAGCAAAATAGAGAGGATATATTGGAGGCCTTCAATAGATGGAAATCTAGTCAGACATTACCAGAAGATGGACATAAGAAGGTTAAGTTGATATGTTCATATTGTAAGAAGCATGATGAAACTGAAGTGCCTGATCCTTACTATGGTGGACAGAAGGGGTTTGAGAAGGTATTAGATTTACTTGAAGATGCTTGTGAATCATTGCTGGAAAGCATTTTGGCAGAAAATAAACATATACAAGAATCCTAA 747 0.3896 MRTLYTDATNFTNLRVCHYSQFLSPNPNTLSLVPSSSKIPHLTSISSKKQRFYSSSFSSLIRSSMASSLPTSSSIDTKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDSNFKIDSAGTIDYHEGNEADQRMRAASKRRGIKITSISRPIRPSDFVDFDLILAMDKQNREDILEAFNRWKSSQTLPEDGHKKVKLICSYCKKHDETEVPDPYYGGQKGFEKVLDLLEDACESLLESILAENKHIQES* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1615 248 Pfam Low molecular weight phosphotyrosine protein phosphatase 82 235 IPR023485 -
Lan8g1615 248 PRINTS LMW phosphotyrosine protein phosphatase signature 82 99 IPR017867 GO:0004725|GO:0006470
Lan8g1615 248 PRINTS LMW phosphotyrosine protein phosphatase signature 125 141 IPR017867 GO:0004725|GO:0006470
Lan8g1615 248 PRINTS LMW phosphotyrosine protein phosphatase signature 209 224 IPR017867 GO:0004725|GO:0006470
Lan8g1615 248 SMART LMWPc_2 80 237 IPR023485 -
Lan8g1615 248 Gene3D - 63 243 - -
Lan8g1615 248 SUPERFAMILY Phosphotyrosine protein phosphatases I 78 238 IPR036196 -
Lan8g1615 248 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 8 243 - -
Lan8g1615 248 CDD LMWPTP 81 236 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1615 14 242 Protein tyrosine phosphatase (PTP) family AT3G44620 59.921 2.44e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1615 K25307 - qsu:111996756 332.413