Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1614 ATGAAGGTGATCGCAGCTTACTTGCTCGCTGTTTTGGGAGGCAATTCTTCCCCTTCAGCTCAGGATCTTAAACACATCCTTGCTTCAGTTGGAGCCGAGGCTGATGATGACAGAATTCAGCTGCTCTTAACTGAAGTTAAGGGCAAGGACATAACTGAACTGATTGCTAGTGGAAGGGAAAAGCTAGCTTCAGTTCCTTCTGGTGGTGGTGCCGTGGCTGTTGCTGCTGCACCTGCAGCAACCGGTGCTGCTGCTCCTGCTGCTGAGGCAAAGGTGGAAAAGAAGGTCGAAGAGAAGGAGGAGTCTGATGATGACATGGGCTTCAGTTTATTTGACTAA 339 0.4956 MKVIAAYLLAVLGGNSSPSAQDLKHILASVGAEADDDRIQLLLTEVKGKDITELIASGREKLASVPSGGGAVAVAAAPAATGAAAPAAEAKVEKKVEEKEESDDDMGFSLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1614 112 Hamap 50S ribosomal protein L12 [rpl12]. 2 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lan8g1614 112 Pfam 60s Acidic ribosomal protein 17 111 - -
Lan8g1614 112 Gene3D - 1 59 IPR038716 -
Lan8g1614 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 112 - -
Lan8g1614 112 CDD Ribosomal_P2 1 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan8g1614 112 MobiDBLite consensus disorder prediction 87 112 - -
Lan8g1614 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 112 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1614 Lan-Chr8 23144801 23146417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1614 1 112 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.750 2.94e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1614 K02943 - pvy:116129032 130.954