Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1613 ATGAACGGCGCCGGAAACCGTAGATGGGAGCGCAGAGACAATAACAATATCAACAAGAACGGAGGATCCAATAAGCAGAAGCTGATTCGTAGTGCTGAGGAAGAACTCGAGTCCAAATTAGGGTTCGATATTTTCTCCGAAGGTGATAAACGACTTGGATGGTTGCTCAATTTTGCAACGTCATCGAGTGAAGATGAAGACACACACAAAGTCTACAGTTGTGTTGATCTATACTTTGTTACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTATGCAGCTACAAAGGATAAAATGGAGATGGACGTTGAAGCATACCTGAGGCGACGTTATGAAAGCCAGATTGCAGATATTGAAATAATAGAGAAGGAGGACCTTGATCTTAAAAACCATTTGTCTGGATTAAAAAAATATTATTTAAAGCTTTCATTTGATACCGTGCAACAATTGATGAATGTGAAGAGGGACCTCATGCATGTAGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAACCTCAAGATTTTCTAGATTGCATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTATGATGTTGGAGTGTCCAATACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCATTTGATATTGAGACCACAAAACTTCCATTAAAATTTCCTGATGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGGTACTTGATCATAAACCGAGAGGTACATGTTAATGACAAATGTTAA 894 0.3915 MNGAGNRRWERRDNNNINKNGGSNKQKLIRSAEEELESKLGFDIFSEGDKRLGWLLNFATSSSEDEDTHKVYSCVDLYFVTQDGSSFKTKYRFRPYFYAATKDKMEMDVEAYLRRRYESQIADIEIIEKEDLDLKNHLSGLKKYYLKLSFDTVQQLMNVKRDLMHVVERNQAKSDAADAYESILTGRREQKPQDFLDCIIDLREYDVPYHVRFAIDNDIRSGQWYDVGVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDIIMMISYMVDGQGYLIINREVHVNDKC* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1613 297 Pfam DNA polymerase family B, exonuclease domain 81 292 IPR006133 -
Lan8g1613 297 MobiDBLite consensus disorder prediction 1 15 - -
Lan8g1613 297 SUPERFAMILY Ribonuclease H-like 68 292 IPR012337 -
Lan8g1613 297 MobiDBLite consensus disorder prediction 1 26 - -
Lan8g1613 297 Gene3D - 245 297 IPR036397 GO:0003676
Lan8g1613 297 Gene3D DNA Polymerase, chain B, domain 1 54 238 - -
Lan8g1613 297 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 38 293 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1613 Lan-Chr8 23138299 23140896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1613 6 291 Core DNA Replication Machinery Family AT1G08260 77.622 4.74e-151 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1613 K02324 - lang:109353678 588.571