Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1612 ATGAACGGCGCCGGAAACCGTAGATGGGAGCGCAGAGACAATAACAATATCAACAAGAACGGAGGATCCAATAAGCAGAAGCTGATTCGTAGTGCTGAGGAAGAACTCGAGTCCAAATTAGGGTTCGATATTTTCTCCGAAGGTGATAAACGACTTGGATGGTTGCTCAATTTTGCAACGTCATCGAGTGAAGATGAAGACACACACAAAGTCTACAGTTGTGTTGATCTATACTTTGTTACACAGGATGGGTCTTCATTCAAGACAAAATACAGATTTCGTCCTTATTTCTATGCAGCTACAAAGGATAAAATGGAGATGGACGTTGAAGCATACCTGAGGCGACGTTATGAAAGCCAGATTGCAGATATTGAAATAATAGAGAAGGAGGACCTTGATCTTAAAAACCATTTGTCTGGATTAAAAAAATATTATTTAAAGCTTTCATTTGATACCGTGCAACAATTGATGAATGTGAAGAGGGACCTCATGCATGTAGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGATGCCTATGAGTCTATATTAACTGGGAGAAGAGAACAAAAACCTCAAGATTTTCTAGATTGCATAATCGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGAGTGGCCAGTGGTATGATGTTGGAGTGTCCAATACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCATTTGATATTGAGACCACAAAACTTCCATTAAAATTTCCTGATGCTGACTATGATATAATTATGATGATTTCATACATGGTAGATGGACAAGGGTACTTGATCATAAACCGAGAGCGTGTTGGGGCAGATATAGAAGATATAGAGTACACTCCAAAGCCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTCAGCTTCTCAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTATGTGACTTATAATGGTGATTTCTTTGATTGGCCATTCCTGGAACGAAGGGCAGCCAGTCACGGGTTCAAAATGAGTGATGAATTGGGGTTTCAATGTGATACAAATCAAGGAGAATGTCGTGCCAAGTTTGCTTGTCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTTCCACAGGGGAGCCAAGGCCTAAAGGCTGTCACAAAAGCAAAGTTGGGTTATGATCCGTTGGAGGTAAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTACTCTGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCCACTATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTCCAGGCATACAAGGCCAATGTTATATGTCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAACAACCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTTGAATGCCTAGAAACTGGTGTGTTTAGATCTGATATTCCATCTAGTTTTACCCTTGAGCCATCTGCCTATGAGCAATTGATCAACAACCTTGACCGAGATCTACAGTATGCTATAAGAGTAGAGGGCAAGATGGATTTGGAATCTGTCTCCAATTATGATGAAGTAAAAGATGCTATCATGGAAAAGCTGATAAAATTACGAGATAAGCCAATACGTGAAGAATGCCCCCTCATTTATCATCTGGATGTAGCTGCCATGTATCCAAACATAATTTTAACAAACCGGCTTCAGCCACCATCAATTGTTACGGATGAGGTTTGCACTGCTTGTGATTTCAACCGTCCTGGAAAGACTTGTTTACGAAATCTTGAGTGGGTTTGGCGTGGAGAAACATTCACGGCAAAGAAAAGTGACTATAATCATGTAAAGAAGCAGATTGAGTCAGAGTTTGTTGATGGTGCTGATGATAGGCCATCAAAGTCTTTTCTTGACCTGCCCAAGTCAGAGCAACAATTAAGGCTGAAAGAACGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTCGACAAACCAGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTCAACAAAGTTTGGAAGGGAAAACTATTTGAAGCAAAATCCAGTGGGAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCCCACAAGTGTATTCTTAATTCCTTTTATGGATATGTGATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCAAAAATCATTCAGAATGCCCGCCTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTTGACACAGATGGAATCTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGAATCAAAGAGGAAGTTGACAATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAATAAATAATACAAATGACCAGTACCAGACACTCACAGATCCTATTAAGAAAACTTATACAACTCATAGTGAATGCTCTATTGAGTTCGAGGTGGATGGACCGTACAAGGCTATGATCCTTCCTGCTTCAAAGGAAGAAGGAATTCTAATTAAAAAGCGGTATGCTGTTTTTAATGATGATGGAACTCTCGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGCTCAACCTTAGAAGAATGCTATTCAGCTGTCGCTTCTGTCGCAAACAGCTGGCTTGATCTTCTTGATAGCCAAGGAAAGGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAATTGATTATGGTGAGAAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTTGCTGACTTTCTAGGTGTTGAAATGGTCAAAGACAAAGGTCTTCGATGCCAATACATTGTAGCAAGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACAGATGCTGACAGGATGAAGTTCTTTGTCCGGAAATGGTGCAAGGTCTCATCAGATGTTGGCATCCGATCAATAATTGACTGGTCCTATTACAAGCAGCGGCTTAGTTCTACAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAACAAGTTGCAAATCCCGTCCCTAGAGTAGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAATTAGTTGATCTCTTCCCAAAAGTAAGCTGGGATGAGTGCTTAAAAAGGCATGACGATTCTGATAGTATCCGCCTTGTGAGGGATGAAGAGATCGTTAATGACTTGGAGGACTTTGGAAACAAGACCAAGAATTCTACATTTGGACCTAGACCAATTATACGACATTATGAAGCTAATAATGAACGGCATCCTTTGAATCTCAATTGTGAAGAAGGTTTTTACCAACAACAAAATGATAATAACAACAACGATCAGCCACTTTCACAATTACAACAAAATGATATATCGCATGAAGATGTTGATAGAACTATAGATTATCAAGGATGGCTTCAAATAAAGAAGAGAAAATGGAAACATATCCTAGAAAGGAGAAAGAAGCGAAGATTGCAGAGTTCTAAGGATTCTGACCGTGTAAATGACACTCTTGAACAAATAAACGGTAAGAATAGTCAGGGAAGAAGTAACGTCAGTTCATATTTCAGAAGACATGAGGTGCTTCTGACGCAGTACCACTGGCAGATAATACAGCTTGTTCACAGTTCACAGATTGGACAGTTTTTTGCTTGGGTTGTTGTTGATGGGGTTATGCTTAAGATTCCTGTTTGTGTTCCTAGAGTCTTTTACCTCAATTCTAGATCACCAATTACTGACGAATTTCTGGGGAAACGTGTCAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACCTGTATGAGGTCACAATTAATGAAGTTCAGTATAGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTTGCTGATCCTGATGTTGAGGGAATATATGAAACCAAGGTGCCACTGGAGTTCAAGGCTATAATCCAACTTGGTTCTGTATGTAAGGTGGACAAAACTTCTAAAAAACGTAGTCTACAAGACCCATGGAATTTGAGTGAATTACACATGAAGACCACAACAGAATGTGTTTATCTTGAAAAATCCATACCCTTCTTTTACCTCTATCATAGCATCTCTGAGGGACGGGCTATATATGTTGGGTATTTTCCTGCATCAAAAGCAATAACAGTTGTGGTAGTTAATCCCTACCAAAACAAAGATTTATCACCATCTTTTCTTGAAAGACAATTTCACGATGGCTGCCGTGCTTTGTCTATTGAGGCACCTCCCAGGAATGACATTACTTTTAAGGTGGACTACGTTGGACATGTCAAGGATGCTGAAACAGTGATGCAAAGAACAATAGATGATCACAGGAATGAGCACCATGGGCCTATGGTTGCTGTCATTGAATGCCCCAATGTTCAACTAGTAAAATTGGGTATTCGAGCTCTAGATGAATTTCCATGCCTGAGTGTACCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAATTGGAATGCAACGTTGTGCTGCGTCGGCCCAATGGCTAAACGAGAGAATTGCTATCTCAAGATATGCGCATGTGCCATTGGGGAATTTCGAACTTGACTGGCTTATATTTACAGTGGATACTTTCTTTTCAAGAGCATTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGCATCAGTGATGAAGAGATCTGTTTTGTGGACGAGGTCCGCCAACCTGTTTGTAATTTTCCTGGAGCTTATAGAAAAGTTTCTGTGGAGCTAAAGATTCATCACCTGGCTGTGGATGCTCTTCTAAAATGCAACCAGATTAATGAATTGGAAGGAGGTGCTTTATTAGGATTTGACCATGAATTCAATTCTGGAGCATTTTCCGTGGATGGTCAGAATGGATTTGATGAGGCTTCCTCATGTGCACATGCCCTTCGAGTTCTAAAACAATTGATCCAGCGATGCCTTTCGGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTACAAAACCTATATCGGTGGCTTTGCAGTCCTCGATCAAAACTTCATGATCCAGCTCTTCACCAGCTACTCCACAAGGTAATGCAAAAGATCTTTGCATTGTTGTTGGCAGAGTTCCGCAAGCTGGGTGCAACAATTGTGTTTGCAAACTTCTCAAAGATTATTATAGACACGGGGAAATATGATCTGTCTACAGCCAAAGCTTACTGTGATAGTTTGTTGCGAACTATACAATCTAGAGACCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCACTCATTGCTATTCATGGATCAGCATAACTATGGTGGAATACCAGTAAAATTGGACGAAGCCATAAATGATGACTCTCAAGTTGACATTATATCGAGCTGGTCTATTGCTGAATATTTGCCCAAGAAAATTCAGGACCATTTCATTTTCATCGTTTCTCAGTTCTTGTATATGCCCTGGAAGTATGCACAAAAACAAGCAGCAAAAAGGTCTTCATTGCTGAATGACGATGAATCCTGCACCCCATCGATTAACATCGGATCTGCAGAGGCTATTGAATCAGAAATAACGGAGAATATTAAACAGCAGATTAGCTCTTATTTTGCAGACAAACTTCTAGGAATTGTTAGCGATATTGTTCTTCATATGAAGGGGACAAACAAATCAGAAAACGACCAGAGTATATCATCTGGCCTTCCTCAACTTGGGGGTGACGTTCATAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTTTGTGCTGTCCTGGCCCTCGACCAAAGTGTACATCATGATGTTTTGGTCATGAGAAGGAATTTATTGAAATATGTTCGTGTCAAAGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCTTGTCAATCCTTCATCTTATCCAATGTCATATGCAGCTATTGTAGTGACTGCAGAGACTTGGACTTGTGCCGTGACTCGGCATTACTGACTCAAGAGTGGCATTGTGCCGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAGAATGCTCTACTTCAGATTGTACGACAAAGAGAACGACTATACCACCTGCAAGATCTGGTGTGTGTCAGGTGCAACCAGGTTAAAGCTGCACATTTAGCTCAGCAATGTGCATGTGGGGGCTCCTTTAGGTGCAAGGAAGGCGTAAGTGAGTTTCGCTCTAAAATGCAGGTTTTCTTAAACGTTGCAATTCGACAGAAATTCCAACTTCTCCAAGAATGCACCTCCTGGATTTTAAAATCTTAG 6660 0.4081 MNGAGNRRWERRDNNNINKNGGSNKQKLIRSAEEELESKLGFDIFSEGDKRLGWLLNFATSSSEDEDTHKVYSCVDLYFVTQDGSSFKTKYRFRPYFYAATKDKMEMDVEAYLRRRYESQIADIEIIEKEDLDLKNHLSGLKKYYLKLSFDTVQQLMNVKRDLMHVVERNQAKSDAADAYESILTGRREQKPQDFLDCIIDLREYDVPYHVRFAIDNDIRSGQWYDVGVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDIIMMISYMVDGQGYLIINRERVGADIEDIEYTPKPEFEGCFKVTNVQNEIQLLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAASHGFKMSDELGFQCDTNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLETGVFRSDIPSSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKDAIMEKLIKLRDKPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRNLEWVWRGETFTAKKSDYNHVKKQIESEFVDGADDRPSKSFLDLPKSEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLFEAKSSGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKESKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIKKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANSWLDLLDSQGKDIADSELLDYISESSTMSKSLIDYGEKKSCAVTTARRLADFLGVEMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDADRMKFFVRKWCKVSSDVGIRSIIDWSYYKQRLSSTIQKIITIPAAMQQVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDLFPKVSWDECLKRHDDSDSIRLVRDEEIVNDLEDFGNKTKNSTFGPRPIIRHYEANNERHPLNLNCEEGFYQQQNDNNNNDQPLSQLQQNDISHEDVDRTIDYQGWLQIKKRKWKHILERRKKRRLQSSKDSDRVNDTLEQINGKNSQGRSNVSSYFRRHEVLLTQYHWQIIQLVHSSQIGQFFAWVVVDGVMLKIPVCVPRVFYLNSRSPITDEFLGKRVNKTLPHGRHSYNLYEVTINEVQYREASKKLAALLADPDVEGIYETKVPLEFKAIIQLGSVCKVDKTSKKRSLQDPWNLSELHMKTTTECVYLEKSIPFFYLYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSPSFLERQFHDGCRALSIEAPPRNDITFKVDYVGHVKDAETVMQRTIDDHRNEHHGPMVAVIECPNVQLVKLGIRALDEFPCLSVPSNARDSQYQILGWQQVAAKIGMQRCAASAQWLNERIAISRYAHVPLGNFELDWLIFTVDTFFSRALHDNQQVLWISDDGLPDLGGISDEEICFVDEVRQPVCNFPGAYRKVSVELKIHHLAVDALLKCNQINELEGGALLGFDHEFNSGAFSVDGQNGFDEASSCAHALRVLKQLIQRCLSDAVTSGNVYADAILQNLYRWLCSPRSKLHDPALHQLLHKVMQKIFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSTAKAYCDSLLRTIQSRDLFEWIELEPLQFWHSLLFMDQHNYGGIPVKLDEAINDDSQVDIISSWSIAEYLPKKIQDHFIFIVSQFLYMPWKYAQKQAAKRSSLLNDDESCTPSINIGSAEAIESEITENIKQQISSYFADKLLGIVSDIVLHMKGTNKSENDQSISSGLPQLGGDVHRGDAALEFIKHVCAVLALDQSVHHDVLVMRRNLLKYVRVKEFAPEAEFRDPCQSFILSNVICSYCSDCRDLDLCRDSALLTQEWHCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCNQVKAAHLAQQCACGGSFRCKEGVSEFRSKMQVFLNVAIRQKFQLLQECTSWILKS* 2220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1612 2219 SMART DUF1744_2 1521 1905 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lan8g1612 2219 SMART polmehr3 246 849 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lan8g1612 2219 MobiDBLite consensus disorder prediction 1 15 - -
Lan8g1612 2219 SUPERFAMILY DNA/RNA polymerases 476 1147 IPR043502 -
Lan8g1612 2219 Gene3D DNA Polymerase, chain B, domain 1 55 237 - -
Lan8g1612 2219 Gene3D - 948 1133 IPR042087 -
Lan8g1612 2219 Pfam DNA polymerase family B, exonuclease domain 81 407 IPR006133 -
Lan8g1612 2219 Gene3D - 245 475 IPR036397 GO:0003676
Lan8g1612 2219 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 38 2217 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Lan8g1612 2219 SUPERFAMILY Ribonuclease H-like 68 474 IPR012337 -
Lan8g1612 2219 MobiDBLite consensus disorder prediction 1 26 - -
Lan8g1612 2219 Pfam Domain of unknown function (DUF1744) 1538 1905 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lan8g1612 2219 Gene3D Palm domain of DNA polymerase 755 944 IPR023211 -
Lan8g1612 2219 MobiDBLite consensus disorder prediction 1286 1312 - -
Lan8g1612 2219 Pfam DNA polymerase family B 766 1071 IPR006134 GO:0000166|GO:0003677
Lan8g1612 2219 CDD DNA_polB_epsilon_exo 247 450 - -
Lan8g1612 2219 CDD POLBc_epsilon 510 1129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1612 Lan-Chr8 23106336 23136670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1612 24 2217 Core DNA Replication Machinery Family AT2G27120 68.033 0.0 3039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1612 K02324 - gmx:100812003 3770.32