Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1605 ATGGCGGAAGAACATCGATGCCAACCTCCACGTCTCTGCAACAACAATTGCGGCTTCTTCGGTAGCCCTACCACGCAGAATCTCTGCTCCAAATGCTTCCGTGATTTGCAGCTCAAAGAACAACAATCTTCCTCCGCCAAATTGGTTCTCAACCAAACCCTCGTTCCTCCGCCCGCAATTTCTCAACCGTCTCCTTCGACGCCGTCCGGATCGATCGGCGCTGATTCATCGTCTTCGATTGAAGTTGATTTATCACGCGCCACCACGGAGGAGGAGAAGAGCGGATCTGTGGCACAACCGAACAGATGCGGGAATTGCAGGAAGCGCGTGGGACTCACGGGGTTCAAGTGCAGGTGTGGGTTAACATTATGCGGGTCGCACCGGTACCCGGAGAAGCATGGGTGTGAGTTTGATTTCAAAGAAATGGGAAGGGATCAGATTGCGAAGGCTAACCCGGTGGTTAAGGGAGAGAAGCTCCGGAAGATATGA 489 0.5317 MAEEHRCQPPRLCNNNCGFFGSPTTQNLCSKCFRDLQLKEQQSSSAKLVLNQTLVPPPAISQPSPSTPSGSIGADSSSSIEVDLSRATTEEEKSGSVAQPNRCGNCRKRVGLTGFKCRCGLTLCGSHRYPEKHGCEFDFKEMGRDQIAKANPVVKGEKLRKI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1605 162 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 162 - -
Lan8g1605 162 Gene3D - 74 158 IPR035896 -
Lan8g1605 162 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Lan8g1605 162 MobiDBLite consensus disorder prediction 65 84 - -
Lan8g1605 162 ProSiteProfiles Zinc finger AN1-type profile. 97 143 IPR000058 GO:0008270
Lan8g1605 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 54 - -
Lan8g1605 162 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Lan8g1605 162 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 162 - -
Lan8g1605 162 SUPERFAMILY AN1-like Zinc finger 89 157 IPR035896 -
Lan8g1605 162 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lan8g1605 162 MobiDBLite consensus disorder prediction 55 99 - -
Lan8g1605 162 Pfam AN1-like Zinc finger 103 139 IPR000058 GO:0008270
Lan8g1605 162 Gene3D - 1 54 - -
Lan8g1605 162 SMART AN1_Zf_4 103 140 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1605 Lan-Chr8 23000805 23001720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1605 1 162 C2H2 Transcription Factor Family AT3G52800 52.023 1.26e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1605 - - gmx:106795660 229.18