Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1600 ATGGAGAGCCAAAGAATAGGACAAATGGAGTTATCTGAGTCAGGGACTTCAAGTCACCATGTCTCTTATGGAGTTCTTCATCATGGGATTAATATTCCTACATCAAGCTTAATGAATCAAGGGTCTGATTTTGATTTTAGAGAGCTGGAAGAGGCAATGGTTCTGCAAGGAATTAAGGCTAGAAATGATGAAGCCAAAGCAGCTTTATCCACAGGCAGGCCTGCTGCTACACTAGAAATGTTCCCATCATGGCCAATGAGATTTCAGCAAACCCCTAGAGTATTAGGAAGTTCAAAGTCAGGAGGAGAAAGCACTGATTCAGGATCAGGAGTGAACACTTTTTGTTCAAGCAAAACAAGTGAACCACCACAGTTTGACACAGAATCTCCAATAAGTAAAAAGGCATCTTCTTCAGATCAACATCATCAGGTTTTTGATCAGCAAAGACAACAAAACCAACTTCAACAACAACCTGAGCTTATGCCATTTGATGCCTCAAGAACAGGCCCATCACTGAATCAATCACCTGCCAAATCAACACAGGATAAGAAGAAAGGAGTTGGATCCATATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCACAGAACAGAGAGGCAGCAAAGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTAACCAACTTGAACAAGACCTTCAAAGAGCACGTTCTCAGGGCATGTTCTTGGGTTGTGGTGGCACTGGTGGAAATATAAGCTCTGGAGCTGCAATGTTTGATATGGAGTATGGTAGATGGTTAGAAGATGACCACCGGATGATGGTGGAGCTCCGGGCCGGGCTGCAGGCGCCGCTATCGGACAATGAGCTAAGAGTCATGGTGGATGGATATCTTTCTCATTATGATGACATATTCCGGCTGAAGGGGATGGTTGCAAAAACAGATGTATTTCACCTTATTAATGGCATGTGGAACTCCCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCCTCCGAGCTCATCACTATGTTGATACAACAATTGGAGCCACTAGCGGAGCAGCAAATAATGGGAATGTATGGACTGAGGCATTCATCACACCAAGCGGAGGAAGCTCTATCTCAAGGCCTTGAACAACTGCAGCAGTCTCTCGTTGAAACCATCGCCGGCGGCCCCGTCGTTGACGGTGTTCAACAGATGATGGTGGCCATGGGCAAGCTTTCCAACCTTGAAGGATTTCTACGTCAGGCTGATAATTTGAGGCAACAAAGCCTTCATCAAATATGTCGATTATTAACAATTCGTCAAGTTGCAAGGTGTTTTATTGTGATCGGAGAATATTATAGTCGTCTTCGTGCTCTCAGTTCTCTTTGGACATCAAGGCCACGAGAGACCTTAATGGGGGATGATAACTCATGCCAAACAACCACCGACATGCAAATGGTTCAAGCATCTCAGAATCATTTCCAGAGTTTCTGA 1503 0.4431 MESQRIGQMELSESGTSSHHVSYGVLHHGINIPTSSLMNQGSDFDFRELEEAMVLQGIKARNDEAKAALSTGRPAATLEMFPSWPMRFQQTPRVLGSSKSGGESTDSGSGVNTFCSSKTSEPPQFDTESPISKKASSSDQHHQVFDQQRQQNQLQQQPELMPFDASRTGPSLNQSPAKSTQDKKKGVGSISEKPLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLNQLEQDLQRARSQGMFLGCGGTGGNISSGAAMFDMEYGRWLEDDHRMMVELRAGLQAPLSDNELRVMVDGYLSHYDDIFRLKGMVAKTDVFHLINGMWNSQAERCFLWIGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSHQAEEALSQGLEQLQQSLVETIAGGPVVDGVQQMMVAMGKLSNLEGFLRQADNLRQQSLHQICRLLTIRQVARCFIVIGEYYSRLRALSSLWTSRPRETLMGDDNSCQTTTDMQMVQASQNHFQSF* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1600 500 MobiDBLite consensus disorder prediction 92 199 - -
Lan8g1600 500 MobiDBLite consensus disorder prediction 92 184 - -
Lan8g1600 500 Pfam Seed dormancy control 279 353 IPR025422 GO:0006351|GO:0043565
Lan8g1600 500 Coils Coil 217 244 - -
Lan8g1600 500 PANTHER TRANSCRIPTION FACTOR TGA9 65 479 - -
Lan8g1600 500 SMART brlzneu 194 270 IPR004827 GO:0003700|GO:0006355
Lan8g1600 500 ProSiteProfiles DOG1 domain profile. 261 469 IPR025422 GO:0006351|GO:0043565
Lan8g1600 500 Pfam bZIP transcription factor 197 238 IPR004827 GO:0003700|GO:0006355
Lan8g1600 500 PANTHER TRANSCRIPTION FACTOR TGA9 65 479 - -
Lan8g1600 500 SUPERFAMILY Leucine zipper domain 198 240 IPR046347 GO:0003700|GO:0006355
Lan8g1600 500 Gene3D - 197 247 - -
Lan8g1600 500 CDD bZIP_HBP1b-like 198 249 - -
Lan8g1600 500 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 240 IPR004827 GO:0003700|GO:0006355
Lan8g1600 500 MobiDBLite consensus disorder prediction 185 199 - -
Lan8g1600 500 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1600 Lan-Chr8 22962258 22969887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1600 175 500 bZIP Transcription Factor Family AT1G08320 71.560 1.63e-178 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g1600 DOG1 4.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1600 K14431 - gmx:100775461 721.465