Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1590 ATGGAAAATCTTCCACCTGGTGTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTTCCTTCTATTTATACAACAAGCTCCAAGGCCAAATAAACGCCATAGACAGAGTTATCCCAGTCATTGACATAAATGCCGTAGAACCCTCGACCCTCCCGGCACTTGCTGGGGAGCTATGTCGTGGGGACAGAGAGCAATGGTTTTTCTTCACAGCAGGTCAAGAAAGAGAAGCAAGGGGAGGAAGACCAAGCAGAACAACTGCTTGTGGATATTGGAAAGCTACAGGTTCTCCTGGATATGTTTACTCTTCTGATAACAATGTCATTGGGGTGAAGAAAACCATGGTTTTCTATAAAGGGAAAGCTCCTACAGGAAAGAAAACCAAATGGAAGATGAATGAGTACAAAGCCATTCAACCCTCTAATCAATCCACCACTGCCACCCCTCAGTTGAGGAGGGAATTCAGCTTGTGCCGGGTTTATATCATATCAGGAAGCTTCAGAGCATTTGATAGGCGTCCATTAGAGAATAAAAGAGTGGAGTCAAGGTTTGATGAGATTGAAGAGAACAGAGTTGTTGCAGTGGTGGATAGATCATGTTCATCTCAAACTCCACACTTAGTAGGAGACTACAATGGTTCTATGCAAGAGGTTTGTGGATCAAATAGCACAAATTGGAATGTAAATAATGATGAGATTCAACTCCAAGAACCACTTTGGGAATGGGAACAACTTAATTGGTTATAA 741 0.4265 MENLPPGVRFFPTEEELVSFYLYNKLQGQINAIDRVIPVIDINAVEPSTLPALAGELCRGDREQWFFFTAGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNNVIGVKKTMVFYKGKAPTGKKTKWKMNEYKAIQPSNQSTTATPQLRREFSLCRVYIISGSFRAFDRRPLENKRVESRFDEIEENRVVAVVDRSCSSQTPHLVGDYNGSMQEVCGSNSTNWNVNNDEIQLQEPLWEWEQLNWL* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1590 246 Gene3D NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Lan8g1590 246 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 245 - -
Lan8g1590 246 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
Lan8g1590 246 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Lan8g1590 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 245 - -
Lan8g1590 246 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1590 Lan-Chr8 22903867 22905126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1590 2 245 NAC Transcription Factor Family AT3G44350 52.869 4.06e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1590 NAM 4.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1590 - - gmx:100781321 345.895