Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1579 ATGGGGTTTTTGTTGAAGGAAGCTTTGAAGACTTTATGTGCTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCAACAATCCAAAGCTGTTAATCTGGGAAGATTGCTTTTATGAAGACTTGCCATCTCTTTTGCCTCCACGCACTGTTGGGATATCTAATTTGCCATACCAAGATGGGGAAGTATGCTGGTTCTCTTCAGAGTCTCAGCTGGGGATTGAGGAGGGCAAAGTAGGTTCTTTGATTAACAAAATGATGGTGAACAATTCGGTCAATATCATTGGTCAAGGGATAATTGGACGGGCAGCATTTACTGGAAACCATATGTGGATTCTCTTGAACAATTTCAATAGAGATGCATGTCTACAAGAGGTATATACTGAGTTGCACTACCAATTTTCAGCCGGAATACAGACACTAGCTGTTATTCCGGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAAAATATGGGATTTGTGAATGACATGAAGAGCTTGATCTTGCAATTGGCAAGTATTCCCGGTGCCCTTCTATCTGAAGACTATTCAGCAAAACTTACTTCTGAAAGACTTTCTGGACCAATGACTGATGGTGTACCGGTGACTGTTGATCTACCTGTCATTACCTCGAACTGCACTCTATCACTACCTAATGGTTCCAATCAACCAAGTAATTCATCTCATGCTTCTTCAAGGTCTATTTCTCAACCCTTTAATAATTACCAGGGTTCGGTATTGACACCTCAAATGCAGAATCTAAACCAGGTATCACCAAAGTATGGTAACCTTTGCCACCCAATGACTCATTCAATGAATAGAGCAATTGTCAGTGCCCAACAAGAGAATAGAGTTGTTGAGGCTAGAGCTGAGGTGATACCTTCAAATCTTGATTTGTATATGCAACAGCATTCTGCTGCATATAATACAAGATATCCATTCAATGAATTAGCTGCTTTTGGCCAATCGAACTTCAGTGATGGCAGCCTAAAATATATGGAACAACAAATCTTTTCCAGCATTGGGGGACAAGGTCAAGTTAATCCTATCATGAATCCATCAAGTACCTCAAATATTTCCCAATTGAAAAGAGATGGAGGCCATATTCTTCAACAAAGTCAGAGTTGTGTTAATAATTCAGTACTTGGAGGAATCCCAATACATAATAGAATGAGTAATCTTTTGAGGACAAATTTGTTCAACAGCTCAGTTTCAAACTCTCCCAAGGTATCCGACACTAATTTTTACGGAATACAAAAAGTTGGGGAGAGACTTCATAATGATAATTCAACTAAAGCTGGGACTTATTCTCTGCCTAATTTGGCAAATCAATCCGTTGCTAGTCATATGCATTTACATGGTTCTCATCAGAAGACTCTCCCTTTAGATTTAAAACATGATCATGAAGCTTTTGTTTCAACTGATCAAGGAATAGATAGTGATTTGCTTCAGGCCCTTAAGATTCCATCTCTTCACCTGGAGGAGCATGCATCTATGAGTGATCACATCCAAGGTTTTGTTCATGATCACCTCAATAAAGATGGCTCCAGCCAACATATGATGAAAATGAATGCTAAACGTGAAGAAGCTAGTGCTCAACTTCCATCAGGCGATGACCTCTTTGACGTTTTAGGTGTGGATTTCAAAAGGAAACTGCTGAATGGAAATTGGGATGAATTGCTTGCTGATGAATCAGATGCCAATGCAGAAAATCTGGATAAAAAGGCGGCAGGCATGAACATGCAGGCTATAGGTTCCGGTGATAGTTACTCAGTTAGTGAGGCGATATCAGATAGTGGAATCTTCTCTGGGACGGACACTGGCCACCTCTTAGATGCTGTGGTATCAAGGGCTCAATCTGCTACTAAACAGAATTCTGATGACATGTCTTGCAGGACAACAGTGACAAGAATTAGCACCACTTCTGTTCCCTCTCCTATCTCCAAGCAGGTCATGTCTGACAATGTTGTCAAGGGGAAATTGATCGATTTCCCTAGAATGGGGGATAAAATAGGTGCTGTGGAAACTAGTTCTTTTAAGTCTGGGTGTATCGAGGATGATGCTGGAAACTGTCCTCAAACCACTTCCATATATGGGTCTGAACTTAGTTCATGGGTTGAGAAAGTTAGTAATGCGAAGCATGAAAATAGTGTTTCAACTGGATATTCTAAGCGGCCAGATGAAGGTTGCAAGTCGAACCGGAAAAGGCTTAAACCTGGAGAGAACCCCAGGCCTCGACCTAAAGACCGCCAAATGATTCAAGATCGGGTGAAAGAGTTGCGGGAAATTGTTCCAAATGGAGCAAAATGTAGCATAGATGCACTTTTGGAAAGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACTGGGGAGTCAAAGATTGTTAGTAAGGAAGGTGGGTTGCTTTTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTAGGTTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTGAATCCACCTGGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTCTTTCTTGAAATAGCTGACTTAATCAGAGGATTGGGTTTAACCATCTTGAAGGGAGTCATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTCGTGGTTGAGGCAAACAGAGATGTAACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTCTGGAGCAAACAGCGAAGGGCATTGCATCTTCTTCGAATGCGTTTGATAACAACATGACGATGTATCATTCTTTTCCGCAAGCTACCCAGATATAG 2847 0.4148 MGFLLKEALKTLCARNQWSYAVFWKIGCNNPKLLIWEDCFYEDLPSLLPPRTVGISNLPYQDGEVCWFSSESQLGIEEGKVGSLINKMMVNNSVNIIGQGIIGRAAFTGNHMWILLNNFNRDACLQEVYTELHYQFSAGIQTLAVIPVLPHGVVQLGSFLPIMENMGFVNDMKSLILQLASIPGALLSEDYSAKLTSERLSGPMTDGVPVTVDLPVITSNCTLSLPNGSNQPSNSSHASSRSISQPFNNYQGSVLTPQMQNLNQVSPKYGNLCHPMTHSMNRAIVSAQQENRVVEARAEVIPSNLDLYMQQHSAAYNTRYPFNELAAFGQSNFSDGSLKYMEQQIFSSIGGQGQVNPIMNPSSTSNISQLKRDGGHILQQSQSCVNNSVLGGIPIHNRMSNLLRTNLFNSSVSNSPKVSDTNFYGIQKVGERLHNDNSTKAGTYSLPNLANQSVASHMHLHGSHQKTLPLDLKHDHEAFVSTDQGIDSDLLQALKIPSLHLEEHASMSDHIQGFVHDHLNKDGSSQHMMKMNAKREEASAQLPSGDDLFDVLGVDFKRKLLNGNWDELLADESDANAENLDKKAAGMNMQAIGSGDSYSVSEAISDSGIFSGTDTGHLLDAVVSRAQSATKQNSDDMSCRTTVTRISTTSVPSPISKQVMSDNVVKGKLIDFPRMGDKIGAVETSSFKSGCIEDDAGNCPQTTSIYGSELSSWVEKVSNAKHENSVSTGYSKRPDEGCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKHTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPGQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTAKGIASSSNAFDNNMTMYHSFPQATQI* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1579 948 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 946 IPR043561 GO:0003700|GO:0006355
Lan8g1579 948 MobiDBLite consensus disorder prediction 735 760 - -
Lan8g1579 948 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 745 794 IPR011598 GO:0046983
Lan8g1579 948 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 946 - -
Lan8g1579 948 CDD bHLH_AtLHW_like 749 818 - -
Lan8g1579 948 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
Lan8g1579 948 MobiDBLite consensus disorder prediction 223 243 - -
Lan8g1579 948 MobiDBLite consensus disorder prediction 721 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1579 Lan-Chr8 22844123 22850436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1579 546 933 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.690 4.39e-115 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1579 - - aprc:113857443 1310.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0395 7 2694801 2701411 Lan8g1579 8 22844123 22850436 LSH
Lan8g1579 8 22844123 22850436 Lan13g0450 13 3275737 3282426 LSH