Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1578 ATGGCAACGTACTTTCATGGTAGCAGCAGTTCAGAAATCCAATCCTCTGCAGAAGGGTTGCAGACACTTTACCTAATGAACCCAAACTACGTACCCTACTCTGACGCGCCGCAACATCCAACACCAAACATGTTATTCATCAATCCCAACACTGCTCCAACTACTACTTCTCCTCCTCACGCGCTAAATCTTTCCAACTTCACCCACGCGCCTCCACCTCCCAACAACAACCATAATCTCCACCACCACCATATGACTGGTGCGACCATTCCTCTCTCAAACACCACCGGATCCACCAACACCGACGAAATCTCCAGCTATCATGACTTTGTGGCCGCAGCCCCTCGTGTCCATTATAACATGTGGGGCTTTGATCAAACCCCATGGTCTGCGGCAGCAGTGACGATAGCTGCGACCCCGTCTAACAATTCGGGGTATGCAACTAACGTCAGTGTTGCAGCGGATATTTCAGAGCAGGTTGGTTTCCATAGGCCTAATAATCAGCAGCAGGGCTTGTCACTTAGCCTCTCTTCTCAACAACCGGAGTATAGATCGCTGTCCGGAGAGATATCTGCGGCGACCCGTGGCAGTGGAATCTCGAGTATGAATAATAATAATAATAATAATAACAACAACAACGGGATTTTGGGGTCGAAGTATTTGAAAGCAACACATGAGCTTCTTGATGAAGTTGTGAATGTGGGCAAGGGAATTTTCAAAGGGGAGTCTATAAACAGTGTTATAAATAAAGAGAAGATGAAAACGGATATTGAATCAACATCTGGGATTGGTGGTGATGGTTCAAGTGGTGGAGGACAAAACAGTGAAAGCAAACAAGGAATTGAACTCAGCACGACACAAAGACAAGAGGCTCAGATGAAGAAATCCAAACTTGTCGGCATGCTCGATGAGGTGGAGCAAAGGTACCGACATTACCACCACCAAATGCAAATAGTGATATCATCTTTTGAGCAAGTAGCTGGTTATGGAGGAGCTAAATCTTATACATCACTTGCTTTGAAGACAATCTCAAAGCAATTCAGATGTCTTAAGGATGCAATATCATCACAAATAAGGGCAACAAGCAAGACATTAGGTGAAGATGATTGCTTAGGAGTCAAGGTAGAAGGTTCAAGGCTTAGGTATGTTGATCATCATCTAAGACAACAAAAGACATTACAACAATTGGGAATGACCCAGCATAATGCTTGGAGGCCACAAAGAGGTTTGCCTGAAAGAGCTGTTTCCATTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCCTATCCTAAGGACTCAGATAAGGTTATGCTTGCAAAACAAACTGGGCTTACCCGGAGCCAGGTGTCTAACTGGTTTATAAATGCCCGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAGTCAAGGAACAAGAGCAGAATCATGGCTCCCATGATAACACAAATAGATCAAAAGATCAATCAAACAAGGAAATGAAGTCACTAGCAACAATTAATGCTGATGCTCTCCAATCCAAAGCAGAAAGTTCCTTCAACAACCAAAACACTTCTCAAACTGAGATCTCAAACTCTAATAGTTTAATTTCAACATCTCCTATGGGAGTATCAACAACCCTCAAATCCCAATCTGGTAATTTCCATCTTGCAGGGTCTTCTCATGACATGCAAAATAATCCAAACAAGAGAAGAAGTTCTGAACTACACAGTTCTCCAGGTAGTGGTATATTTTCAGTGGACATGGACATGAAACCTGGAGAGACAAATAGAGAAATTACCAATAAAGAGTTTGGCATTGAAAACCATGGTAGTGGTGGGGGTTATGGAGCATTTTCTATTGAAGATATTGGAAGGTTTAATAATGTGACTGAGAATTTGGCTCCTAGGTTTGATGGAAATGGTGTTTCTCTCACTCTTGGACTTCCACGTAGTGAGAACTTTCCTCTTTCTGGAACACAGCATGAGTTTCTCTCACAGAACATACATTTGGGAGATGATAGGATTCATGAGATGGGAACCAATGAAAATGAGTTTCATGCCATTAATAGTACTCCACCTTCTTCTCATTCAGGAACCAGCTATGAGAGTATTGACCTTCAAAACAGAAAGAGGTTTGCTGCACAGTTATTGCGGGATTTCGTGGCATAA 2163 0.4286 MATYFHGSSSSEIQSSAEGLQTLYLMNPNYVPYSDAPQHPTPNMLFINPNTAPTTTSPPHALNLSNFTHAPPPPNNNHNLHHHHMTGATIPLSNTTGSTNTDEISSYHDFVAAAPRVHYNMWGFDQTPWSAAAVTIAATPSNNSGYATNVSVAADISEQVGFHRPNNQQQGLSLSLSSQQPEYRSLSGEISAATRGSGISSMNNNNNNNNNNNGILGSKYLKATHELLDEVVNVGKGIFKGESINSVINKEKMKTDIESTSGIGGDGSSGGGQNSESKQGIELSTTQRQEAQMKKSKLVGMLDEVEQRYRHYHHQMQIVISSFEQVAGYGGAKSYTSLALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGVKVEGSRLRYVDHHLRQQKTLQQLGMTQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKEQEQNHGSHDNTNRSKDQSNKEMKSLATINADALQSKAESSFNNQNTSQTEISNSNSLISTSPMGVSTTLKSQSGNFHLAGSSHDMQNNPNKRRSSELHSSPGSGIFSVDMDMKPGETNREITNKEFGIENHGSGGGYGAFSIEDIGRFNNVTENLAPRFDGNGVSLTLGLPRSENFPLSGTQHEFLSQNIHLGDDRIHEMGTNENEFHAINSTPPSSHSGTSYESIDLQNRKRFAAQLLRDFVA* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1578 720 MobiDBLite consensus disorder prediction 512 588 - -
Lan8g1578 720 MobiDBLite consensus disorder prediction 261 292 - -
Lan8g1578 720 SMART prehox3 209 356 IPR006563 -
Lan8g1578 720 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 666 - -
Lan8g1578 720 SUPERFAMILY Homeodomain-like 405 470 IPR009057 -
Lan8g1578 720 MobiDBLite consensus disorder prediction 257 292 - -
Lan8g1578 720 MobiDBLite consensus disorder prediction 474 496 - -
Lan8g1578 720 SMART HOX_1 404 468 IPR001356 GO:0003677
Lan8g1578 720 ProSiteProfiles 'Homeobox' domain profile. 401 464 IPR001356 GO:0003677
Lan8g1578 720 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 8 666 - -
Lan8g1578 720 Gene3D - 407 486 - -
Lan8g1578 720 Pfam Associated with HOX 215 355 IPR006563 -
Lan8g1578 720 MobiDBLite consensus disorder prediction 474 497 - -
Lan8g1578 720 Coils Coil 288 308 - -
Lan8g1578 720 Pfam Homeobox KN domain 421 460 IPR008422 GO:0003677|GO:0006355
Lan8g1578 720 MobiDBLite consensus disorder prediction 512 578 - -
Lan8g1578 720 CDD homeodomain 404 465 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1578 Lan-Chr8 22799446 22804644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1578 1 720 Homeobox Transcription Factor Family AT2G35940 42.318 3.51e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan8g1578 POX 1.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1578 - - gmx:100786883 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0396 7 2730262 2735633 Lan8g1578 8 22799446 22804644 LSH