Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1573 ATGGATGTTGATTCCTCTATGGCGTTGGAGTCCGATCACGATCCGGCGGTGCTGAACCATGCCGTTTCGGCAGAGAGGGAGAGCCAAGAGGATTTGCCGTCCGGCGGAGGATCTCCGTCGACGCCACAGCTTCAACAGCAACAGCAGCCGCTGGTGCAGCAGCAGACGGGGGCCGGTGGTCAGGTGCAGCAGAATCCGGTCGCTGGTCCTAGGCTTGCGCCAACTTACTCGGTGGTGGATGCGATTCTGGAGAAGAAGGAGGATGGGCCGGGGCCGCGATGTGGTCACACGTTGACGGCAGTGGCGGCTGTGGGAGAAGAAGGCACACCGGGGTACATTGGTCCTAGGTTGATATTGTTTGGAGGTGCCACTGCACTTGAAGGGAATTCTGCTGCTTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATTCGTTTAGCTGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGAGTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCCCCAACCCCAAGAGCTGCACATGTGGCAACTGCTGTGGGAACGATGGTAGTTATTCAGGGTGGTATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTTACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGGCCAGGGCCACGTTATGGACATGTAATGGCTTTGGTAGGGCAGAGATATCTCATGGCAATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCGCCTCCATGCATGTATGCAACTGCTAGTGCCCGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCGTATGGTCTTGCTAAGCATAGAGATGGCCGTTGGGAATGGGCAATTGCCCCTGGTGTCTCACCATCTTCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGACTCCATGTGTCTGGCGGGGCTCTTGGTGGAGGACGAATGGTAGAAGACTCATCAAGTATTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCGCAGTGGAGTTGACACGGCGCTGTAGGCATGCTGCTGCTGCTGTTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGTGGAGTCTTGCTGGATGACCTACTTGTTGCTGAGGATCTTGCTGCTGCTGAAACAACTGCCGCTGCTTCACATGCTGCTGCAGCAGCAGCTGCATCTAATGTACAAGTGGGACGGCTACCTGGACAATATGGATTTATTGATGACAGGACAAGGCAAACAATGGCTGAAGCAACTGCTGATGGTGCAGTTGTTTTGGGCAACCCAGTTGCCCCCCCTGTAAATGGTGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGATCTAGAACTTTGAACAGGCGAACTAGCAAGGGTGTTGAGTATCTGGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACGCTGGCTGCTGCCAAGGCGCGACAAGAGAATGGAGAAGTTGAGTTGCCTGACAGAGACCGTGGGGCTGAGGCTACCCCTAGTGGAAAACAAACCTCTTCCTTGATTAAGCCTGATTCTGCAGGGCCAAATAATGTCACTCCTGGTGGAGTTAGGCTACATCACAGAGCTGTGGTTGTTGCTGCAGAGCCTGGTGGAGCACTAGGTGGCATGGTTAGACAGCTATCGATTGATCAGTTTGAAAATGAAGGCAGACGGGTCAGTTATGGGACTCCAGAAAATGCCACTGCTGCTCGAAAGTTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGATAATAGCACACCTCTTAAAGCCTCGTGGTTGGAAACCACCAGTTCGCAGGCAGTTTTTCTTAGATTGCAATGAAATTGCAGATCTTTGTGATACTGCGGAGCGGATATTTTCAAGCGAACCAAGCGTCATACGACTTCGGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTGATGCGCCTGTTTGATGAGTATGGTGCACCATCGACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGTCTGGAAACTATAAGCCTTCTGCTTGCCCTGAAGATTGAATATCCAAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCTGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGAATGGGTGAGAGAGATGGAATCTGGGCATGGCACCGGATAAACCGTGTATTTAATTGGCTTCCTTTGGCAGCTCTGATTGAGAAAAAGATTATTTGCATGCATGGGGGTATTGGTCGTTCTATAAATCATGTGGAACAGATTGAAAATATTCAACGTCCAATTACAATGGAAGCAGGATCCATTGTGCTCATGGATCTATTGTGGTCTGATCCTACTGAGAATGACAGCGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCAGGTTTAGTTACTTTTGGGCCTGATCGCGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTAATGGATGGCTTTGAGCGTTTTGCCCAGGGACATTTGATCACGCTTTTCTCAGCTACAAACTACTGTGGTACTGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGAGATCTTGTTGTTGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCGCCCGAAACGTCACCTGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCGCCGACACCGACTAGAGGCCGTCCTCAAGTAACAAATGACCGAGGCTCGCTTGCCTGGATATAG 3036 0.4914 MDVDSSMALESDHDPAVLNHAVSAERESQEDLPSGGGSPSTPQLQQQQQPLVQQQTGAGGQVQQNPVAGPRLAPTYSVVDAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLSNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSIAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQVGRLPGQYGFIDDRTRQTMAEATADGAVVLGNPVAPPVNGDMYTDISTENAMLQGSRTLNRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKQTSSLIKPDSAGPNNVTPGGVRLHHRAVVVAAEPGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKIIAHLLKPRGWKPPVRRQFFLDCNEIADLCDTAERIFSSEPSVIRLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKIEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRVFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1573 1011 MobiDBLite consensus disorder prediction 987 1002 - -
Lan8g1573 1011 Pfam Calcineurin-like phosphoesterase 708 915 IPR004843 GO:0016787
Lan8g1573 1011 MobiDBLite consensus disorder prediction 556 570 - -
Lan8g1573 1011 SUPERFAMILY Kelch motif 147 437 IPR015915 GO:0005515
Lan8g1573 1011 CDD MPP_Bsu1_C 660 962 IPR041758 -
Lan8g1573 1011 PIRSF STPPP_BSU1 43 1011 IPR012391 GO:0004721|GO:0009742
Lan8g1573 1011 Pfam Galactose oxidase, central domain 228 281 - -
Lan8g1573 1011 Gene3D - 644 983 IPR029052 -
Lan8g1573 1011 MobiDBLite consensus disorder prediction 987 1011 - -
Lan8g1573 1011 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1011 - -
Lan8g1573 1011 Gene3D - 274 494 IPR015915 GO:0005515
Lan8g1573 1011 Pfam Kelch motif 335 380 IPR011498 GO:0005515
Lan8g1573 1011 SMART pp2a_7 680 964 IPR006186 GO:0016787
Lan8g1573 1011 MobiDBLite consensus disorder prediction 571 586 - -
Lan8g1573 1011 SUPERFAMILY Metallo-dependent phosphatases 663 971 IPR029052 -
Lan8g1573 1011 MobiDBLite consensus disorder prediction 33 63 - -
Lan8g1573 1011 MobiDBLite consensus disorder prediction 554 595 - -
Lan8g1573 1011 Gene3D - 56 273 IPR015915 GO:0005515
Lan8g1573 1011 ProSitePatterns Serine/threonine specific protein phosphatases signature. 777 782 IPR006186 GO:0016787
Lan8g1573 1011 MobiDBLite consensus disorder prediction 1 71 - -
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 708 735 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 743 770 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 776 800 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 814 840 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 844 871 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 904 924 IPR006186 GO:0016787
Lan8g1573 1011 PRINTS Serine/threonine phosphatase family signature 926 942 IPR006186 GO:0016787
Lan8g1573 1011 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1573 Lan-Chr8 22738615 22756862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1573 672 907 Calmodulin-binding Proteins AT5G63870 29.044 1.86e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1573 - - zju:107403943 1758.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0400 7 2771627 2783326 Lan8g1573 8 22738615 22756862 LSH
Lan8g1573 8 22738615 22756862 Lan13g0452 13 3310389 3324950 LSH
Lan3g0014 3 162623 172853 Lan8g1573 8 22738615 22756862 PCT
Lan8g1573 8 22738615 22756862 Lan3g0014 3 162623 172853 PCT