Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1571 ATGGCGCCGGAGGCGACAACTCCGGAGGTGGTGGTGGTGGTGAAGGAGGAAACAAGAGAGTACGTTGTTACTCCACCCGGTTTGTGGGTTCAGCCTCTTCCAACCGTTGAAAGGAGGGGAAGAGGAAGGCCTCCTGGTTCTAGAAAATTTCAGAGGATATCTTCCACTAGTGTTTCTCATGTTTGGAATTTTGATCAGTTTCTCATGTTTGATACTTTATTGGTTGAAGCTGGTATTTGGGCAGAAACATCTGTGCTTGACTTAACAGCTTATTATATGGTGACCGTGGTTCCTGGGGAGAATGTGGTGACCAAGTTACTCTCACTTTTTGAAGAGATGTCCCCTGATACTGTTTCTGTACTTTCTGCTACTGGTCAAATATCATCTAGTGTCTTTAGCAGATTTGGTGGTACTGTGACATATGCGGGTCGCCATGAGATTTTATCCTTTTCTGGACAAGGTAATAGTGTACCAGGCGAAAATGCCTTGTTGATCTGTTCACTGGCTGCACCAGATGGAACTGTTTTTGGAGGTGTCATTGAGAGATCAATGATTGCGGCTACCCCTGTTAAAATTGTTATAGCCGTTTTCAAGCAAATGGGCATCTTTAAACAAAGCAAGAGAGGGGACACATCTGGATCTCCAAAAACAAGAGCTGATCAAGATTCAGCCATGGCTCCACCAAGATCAGGATCTGCATAG 702 0.4487 MAPEATTPEVVVVVKEETREYVVTPPGLWVQPLPTVERRGRGRPPGSRKFQRISSTSVSHVWNFDQFLMFDTLLVEAGIWAETSVLDLTAYYMVTVVPGENVVTKLLSLFEEMSPDTVSVLSATGQISSSVFSRFGGTVTYAGRHEILSFSGQGNSVPGENALLICSLAAPDGTVFGGVIERSMIAATPVKIVIAVFKQMGIFKQSKRGDTSGSPKTRADQDSAMAPPRSGSA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1571 233 CDD DUF296 92 197 IPR005175 -
Lan8g1571 233 Gene3D - 91 213 - -
Lan8g1571 233 ProSiteProfiles PPC domain profile profile. 83 218 IPR005175 -
Lan8g1571 233 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 217 IPR039605 GO:0003680
Lan8g1571 233 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 200 - -
Lan8g1571 233 PANTHER DUF296 DOMAIN PROTEIN 15 217 - -
Lan8g1571 233 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 198 IPR005175 -
Lan8g1571 233 MobiDBLite consensus disorder prediction 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1571 Lan-Chr8 22731091 22732407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1571 41 197 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 34.911 3.82e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1571 - - lang:109354030 430.639