Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1562 ATGTTTAATGGTATGATGGATCCTGAGATGTTCAGAATCGCTCAGGAACAAATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCCTCGGAAAGCATGAAGAACATGAGTTCAGAAGACTTTAAAGTTGCTGCTGAGCAGTTAAAGCGGACACGTCCTGAAGAAATGGCTCAGATGGGTGAGAAAATGGCTAATGCAACACCTGATGAAGTAGCAGCTATGCGTGCCCGTGCTGATGCCGAGATCAAATACCAATTAAATGCAGCTGAGATGTTGAAGAAGCAGGGGAATGAACTTCATAATCAGGGAAAGTTCAATGATGCTTTGCAGAAATATCTGCTTGCTAAGGAAAACATCAAAGAAATTCCACCGTTTCAAAGCAGAAAGCTTCTTTTGGCCTGCTCACTCAACTTGATGTCCTGTTACTTGAAGACCAGGCAGTATGAAGAATGCGTAAGAGAAGGTTCTGAGGTTTTGGCATATGATGCCAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAGGCGTACAAGCAACTAGGCCTACTAAATGATGCTGTTACTGATTTGAGCATGGCACTTGAAGTGACCCCTGATGATGATACAATTGCAGAGCTTTTACGGGACACCAAGGAAATGTTGGCAAATGGAGGTGGTGAACATGCACCCAGAGGATTAACAATTGAAGAAATAACTGAAGAAGTCGAGAGTGAGCCTTCTGAAAGCAAGAAAAGCTCATCTTTGAAACCAACAGTGGTTCAACCAAAACAATCTGATGACTCTTCTAAGAGTAGCAGTACAGTTAACAATGGAAATCCAAAAGCATATGCAGAGAGTTTAGATACATTGAAAAATGATCCAGAAGCTATCAGATCATTCCAAAATTTCATTTCAAATGCTGATCCTGCCACTCTTGCTTCTCTGAATACTGGACAATCCAAAGATCTACCTCCAGATATGATTAGAACTGCTTCAAATATGATTGGAAAGATGTCACCCGAGGAACTCCAAAAAATGCTTGACATGGCTGCTTCATTTCAAGGCGACAACCCATTTGCCAGAGGTTCCCCTGATTCTTCTTTCAACACTGGATCAATCCCCCCCAATGTGACACCTGATATGTTTAAAACAGCAAGTGATATGATAAGTAAAATGCCACCAGATGAGCTTCAGAAGATGTTTGAAATGGCATCCTCATTGAAAGGGAAAGAATCTATCCCATCATCATCTGCTGTAGATAAGGATGAAAGAAATGATTCCCGGTCAAATTTCCCATCCTCAAGTAGTAATGGAACTAATGCTTTCCGAGAATCAAGTTCCTTGCATGATGCATTTTCAAATATGAGAAATGCTTCTCAGCCAAACTTCCCTTCCCCGAGCACGGATTTACAAGAACAGATGAGAAACCAGATGACAGATCCAGCTATGCGGCAGATGTTCACATCAATGATTAAAAATATGAGCCCAGATATGATGGCAAACATGAGTGAACAGTTTGGTTTCAATCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAGCCATGTCATCCTTTTCACCTGAGAGCTTGGATAAAATGATGCTTTGGGCAGGCAGGGTTCAGAGAGGAGTTGAAGGTGTAAAGAAGACAAAGAACTGGCTGCTAGGGAAACCTGGTATGGCCTTGGCAATATTCATGCTCATTTTTGCCGTCCTTCTACACCGGTTGGGCTACATCGGCCGCTAG 1764 0.4246 MFNGMMDPEMFRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKVAAEQLKRTRPEEMAQMGEKMANATPDEVAAMRARADAEIKYQLNAAEMLKKQGNELHNQGKFNDALQKYLLAKENIKEIPPFQSRKLLLACSLNLMSCYLKTRQYEECVREGSEVLAYDAKNLKALYRRGQAYKQLGLLNDAVTDLSMALEVTPDDDTIAELLRDTKEMLANGGGEHAPRGLTIEEITEEVESEPSESKKSSSLKPTVVQPKQSDDSSKSSSTVNNGNPKAYAESLDTLKNDPEAIRSFQNFISNADPATLASLNTGQSKDLPPDMIRTASNMIGKMSPEELQKMLDMAASFQGDNPFARGSPDSSFNTGSIPPNVTPDMFKTASDMISKMPPDELQKMFEMASSLKGKESIPSSSAVDKDERNDSRSNFPSSSSNGTNAFRESSSLHDAFSNMRNASQPNFPSPSTDLQEQMRNQMTDPAMRQMFTSMIKNMSPDMMANMSEQFGFNLSKEDAAKAQQAMSSFSPESLDKMMLWAGRVQRGVEGVKKTKNWLLGKPGMALAIFMLIFAVLLHRLGYIGR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1562 587 MobiDBLite consensus disorder prediction 257 289 - -
Lan8g1562 587 SUPERFAMILY TPR-like 96 225 IPR011990 GO:0005515
Lan8g1562 587 MobiDBLite consensus disorder prediction 435 449 - -
Lan8g1562 587 PANTHER OUTER ENVELOPE PROTEIN 61 58 587 - -
Lan8g1562 587 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 587 - -
Lan8g1562 587 Gene3D Tetratricopeptide repeat domain 89 230 IPR011990 GO:0005515
Lan8g1562 587 SMART tpr_5 180 213 IPR019734 GO:0005515
Lan8g1562 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Lan8g1562 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Lan8g1562 587 MobiDBLite consensus disorder prediction 246 290 - -
Lan8g1562 587 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Lan8g1562 587 MobiDBLite consensus disorder prediction 411 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1562 Lan-Chr8 22650690 22656627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1562 99 227 Calmodulin-binding Proteins AT5G48570 32.593 2.35e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1562 - - gmx:100800315 890.182