Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1561 ATGTTTAATGGTATGATGGATCCTGAGATGTTCAGAATCGCTCAGGAACAAATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCCTCGGAAAGCATGAAGAACATGAGTTCAGAAGACTTTAAAGTTGCTGCTGAGCAGTTAAAGCGGACACGTCCTGAAGAAATGGCTCAGATGGGTGAGAAAATGGCTAATGCAACACCTGATGAAGTAGCAGCTATGCGTGCCCGTGCTGATGCCGAGATCAAATACCAATTAAATGCAGCTGAGATGTTGAAGAAGCAGGGGAATGAACTTCATAATCAGGGAAAGTTCAATGATGCTTTGCAGAAATATCTGCTTGCTAAGGAAAACATCAAAGAAATTCCACCGTTTCAAAGCAGAAAGCTTCTTTTGGCCTGCTCACTCAACTTGATGTCCTGTTACTTGAAGACCAGGCAGTATGAAGAATGCGTAAGAGAAGGTTCTGAGGTTTTGGCATATGATGCCAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAGGCGTACAAGCAACTAGGCCTACTAAATGATGCTGTTACTGATTTGAGCATGGCACTTGAAGTGACCCCTGATGATGATACAATTGCAGAGCTTTTACGGGACACCAAGGAAATGTTGGCAAATGGAGGTGGTGAACATGCACCCAGAGGATTAACAATTGAAGAAATAACTGAAGAAGTCGAGAGTGAGCCTTCTGAAAGCAAGAAAAGCTCATCTTTGAAACCAACAGTGGTTCAACCAAAACAATCTGATGACTCTTCTAAGAGTAGCAGTACAGTTAACAATGGAAATCCAAAAGCATATGCAGAGAGTTTAGATACATTGAAAAATGATCCAGAAGCTATCAGATCATTCCAAAATTTCATTTCAAATGCTGATCCTGCCACTCTTGCTTCTCTGAATACTGGACAATCCAAAGATCTACCTCCAGATATGATTAGAACTGCTTCAAATATGATTGGAAAGATGTCACCCGAGGAACTCCAAAAAATGCTTGACATGGCTGCTTCATTTCAAGGCGACAACCCATTTGCCAGAGGTTCCCCTGATTCTTCTTTCAACACTGGATCAATCCCCCCCAATGTGACACCTGATATGTTTAAAACAGCAGATAAGTAA 1182 0.4222 MFNGMMDPEMFRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMSSEDFKVAAEQLKRTRPEEMAQMGEKMANATPDEVAAMRARADAEIKYQLNAAEMLKKQGNELHNQGKFNDALQKYLLAKENIKEIPPFQSRKLLLACSLNLMSCYLKTRQYEECVREGSEVLAYDAKNLKALYRRGQAYKQLGLLNDAVTDLSMALEVTPDDDTIAELLRDTKEMLANGGGEHAPRGLTIEEITEEVESEPSESKKSSSLKPTVVQPKQSDDSSKSSSTVNNGNPKAYAESLDTLKNDPEAIRSFQNFISNADPATLASLNTGQSKDLPPDMIRTASNMIGKMSPEELQKMLDMAASFQGDNPFARGSPDSSFNTGSIPPNVTPDMFKTADK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1561 393 MobiDBLite consensus disorder prediction 257 289 - -
Lan8g1561 393 MobiDBLite consensus disorder prediction 365 383 - -
Lan8g1561 393 MobiDBLite consensus disorder prediction 360 393 - -
Lan8g1561 393 Gene3D Tetratricopeptide repeat domain 89 230 IPR011990 GO:0005515
Lan8g1561 393 PANTHER OUTER ENVELOPE PROTEIN 61 58 391 - -
Lan8g1561 393 SMART tpr_5 180 213 IPR019734 GO:0005515
Lan8g1561 393 SMART tpr_5 103 136 IPR019734 GO:0005515
Lan8g1561 393 SMART tpr_5 146 179 IPR019734 GO:0005515
Lan8g1561 393 MobiDBLite consensus disorder prediction 246 290 - -
Lan8g1561 393 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 391 - -
Lan8g1561 393 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Lan8g1561 393 SUPERFAMILY TPR-like 96 225 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1561 Lan-Chr8 22646468 22650577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1561 99 216 Calmodulin-binding Proteins AT5G48570 33.871 1.31e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1561 - - lang:109354027 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0411 7 2890288 2895701 Lan8g1561 8 22646468 22650577 LSH
Lan8g1561 8 22646468 22650577 Lan13g0518 13 3900403 3906255 LSH