Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1535 ATGTTCCAATCAAACCAGTTTCACAACACATTGGACAACATGGCTCAGAACACTTCCAATAGCGACATCCCTCCAAACCGTGACGATGAGTTGGACAGTGCTAACAAGTCTGGTAGCGAAAACCAAGAAGGTGCATCTGGTGAAGACCAAGAACCTAGCGCAAAGAAAAAGCGCTATCACCGCCACACCCAACACCAGATCCAAGAAATGGAAGCTTTCTTCAAGGAGTGTCCACACCCTGATGACAAGCAAAGGAAGGAACTGAGCCGGGAGTTAGGGTTAGAGCCATTGCAGGTTAAGTTTTGGTTTCAGAACAAGCGCACTCAGATGAAGACCCAGACTGAACGCCATGAGAACACACAGCTTAGAACCGAAAACGACAAGCTTAGAGCTGAAAACATGAGGTATAGGGAAGCTCTTAGCAATGCCCAGTGTCCTAATTGTGGTGGACCAACTGCTATGGGCGAAATGTCATTTGATGAACATCACCTCAGGCTTGAAAATGCAAGGCTAAGAGAAGAGATTGATCGTATTTCTGGAATTGCTGCCAAATACGTGGGAAAGCCAATGGTGAATTATCCAAACCTTTCCCCTTCTCTTCCTCCACGCCCACTAGAACTTGGGGCTAATGGCGGTTTTGGTGGCCATCCAGCTGGGATTCGCGGTGGTGATATGTATGGAGGTGGTGGAGATCTTGTAAGGTCAATTAGTGGACCCACTGAAGCTGATAAGCCATTAATAATTGAGCTTGCTGTTGCAGCTATGGAGGAGCTCATAGGGATGGCACAGATGGGCGAGCCTCTTTGGTTGACCAGTCCGGATGGCACAAAATTTGTGCTAAATGAGGATGAATACATTAGGTCCTTTCCTAGAGGAATTGGACCAAAACCCAATGGCTTTAAATGTGAAGCTTCTCGAGAAACTACTGTTGTTATCATGAACCATGTTAATCTTGTTGAGATCCTCATGGATGTGAATCAGTGGTCCACGGTGTTCTCTGGTATAGTCTCAAGAGCCATGACTCTGGAAGTTTTATCAACGGGGGTGGCCGGGAACTACAATGGTGCCTTACAAGTGATGACAGCAGAACTACAAGTACCTTCACCTCTTGTTCCGACTCGTGAAAGCTATTTTGTAAGGTATTGTAAACAACATGTGGATGGGACTTGGGCAGTAGTGGATGTGTCTTTGGATAATTTGCGCCCTAATCCTTCAGCTAGATGTAGAAGAAGGCCTTCTGGTTGTTTGATTCAAGAAATGCCCAATGGCTATTCAAGGGTGACATGGGTGGAACATGTGGAAGTGGATGATAGAGGTGTTCATAATCTTTACAAGCAGCTTGTTAGCTCTGGACATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTGGGTCGACAATGTGAAAGGCTTGCTAGTGCCATGGCAACAAACATACCCACAGGAGAAGTTGGCGTGATAACAAACCGAGAAGGGAGGAAGAGTATGCTGAAACTGGCAGAGAGAATGGTTATAAGCTTTTGCGCTGGAGTGAGTGCTTCTACTGCTCATACATGGACTACACTGCAGAGTGGAACTGGTGCTGATGATGTAAGGGTCATGACCCGAAAGAGTGTGGATGACCCAGGAAGACCCCCTGGTATTGTTCTAAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCACCAAGAAGAGTTTTTGACTTTCTCCGTGATGAGAATTCCAGAAGTGAGTGGGATATTCTTTCGAATGGTGGAGCTGTCCAAGAAATGGCACACATTGCAAATGGACAAGAAACTGGAAATTGTGTTTCTCTACTTAGAGTGAACAGTGCCAATTCGAGCCAAAGCAACATGTTGATATTACAAGAGAGCTGCATGGATTCAACAGGCTCTTTTGTGATCTATGCTCCAGTAGATATTGTTGCAATGAATGTTGTTCTAAATGGAGGAGACCCAGAATATGTAGCACTTCTTCCGTCAGGATTTGCGATACTCCCAGATGGGACAACAACACATGGAAGTGGCATTGGTGAAACTGGACCTGGTGGATCACTTTTGACTGTGGCATTTCAAATATTGGTTGATTCTGCTCCAACTGCTAGGCTTTCTCTTGGATCTGTTGCTACTGTTAACAATCTTATTGCTTGTACTGTTGAGAGAATCAAGGCCTCCTTATCTCCAGAGCTTCAAGACTAA 2193 0.4542 MFQSNQFHNTLDNMAQNTSNSDIPPNRDDELDSANKSGSENQEGASGEDQEPSAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQTERHENTQLRTENDKLRAENMRYREALSNAQCPNCGGPTAMGEMSFDEHHLRLENARLREEIDRISGIAAKYVGKPMVNYPNLSPSLPPRPLELGANGGFGGHPAGIRGGDMYGGGGDLVRSISGPTEADKPLIIELAVAAMEELIGMAQMGEPLWLTSPDGTKFVLNEDEYIRSFPRGIGPKPNGFKCEASRETTVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHVDGTWAVVDVSLDNLRPNPSARCRRRPSGCLIQEMPNGYSRVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLGRQCERLASAMATNIPTGEVGVITNREGRKSMLKLAERMVISFCAGVSASTAHTWTTLQSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPRRVFDFLRDENSRSEWDILSNGGAVQEMAHIANGQETGNCVSLLRVNSANSSQSNMLILQESCMDSTGSFVIYAPVDIVAMNVVLNGGDPEYVALLPSGFAILPDGTTTHGSGIGETGPGGSLLTVAFQILVDSAPTARLSLGSVATVNNLIACTVERIKASLSPELQD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1535 730 SUPERFAMILY Homeodomain-like 46 113 IPR009057 -
Lan8g1535 730 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Lan8g1535 730 SUPERFAMILY Bet v1-like 240 471 - -
Lan8g1535 730 SMART HOX_1 54 117 IPR001356 GO:0003677
Lan8g1535 730 Pfam START domain 250 469 IPR002913 GO:0008289
Lan8g1535 730 ProSiteProfiles START domain profile. 240 472 IPR002913 GO:0008289
Lan8g1535 730 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Lan8g1535 730 MobiDBLite consensus disorder prediction 1 65 - -
Lan8g1535 730 CDD START_ArGLABRA2_like 244 468 - -
Lan8g1535 730 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 12 726 IPR042160 -
Lan8g1535 730 SMART START_1 249 469 IPR002913 GO:0008289
Lan8g1535 730 MobiDBLite consensus disorder prediction 1 24 - -
Lan8g1535 730 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 12 726 - -
Lan8g1535 730 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Lan8g1535 730 Gene3D - 290 461 IPR023393 -
Lan8g1535 730 CDD homeodomain 56 113 IPR001356 GO:0003677
Lan8g1535 730 Coils Coil 112 139 - -
Lan8g1535 730 Gene3D - 41 130 - -
Lan8g1535 730 SUPERFAMILY Bet v1-like 490 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1535 Lan-Chr8 22433763 22440151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1535 1 727 Homeobox Transcription Factor Family AT1G05230 76.526 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan8g1535 START 1.2e-59 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1535 K09338 - gmx:100782260 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1535 8 22433763 22440151 Lan8g1535 8 22433763 22440151 ECH
Lan7g0426 7 3005395 3031720 Lan8g1535 8 22433763 22440151 LSH
Lan8g1535 8 22433763 22440151 Lan13g0503 13 3732757 3739585 LSH
Lan6g1885 6 29916912 29924173 Lan8g1535 8 22433763 22440151 PCT
Lan8g1535 8 22433763 22440151 Lan6g1885 6 29916912 29924173 PCT