Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1529 ATGGTTGAACGAAAGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAAAGGTCGATGTAACCGAAATAACTGCTCCTTTGCGCATGGGAACGTCGAGCTGCGACGATTCTCTGCCTCATCTAGTGGGAGGAGAGAATATTCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCATTTATCACCTCCTCGAAGGTACTCACCAGCTAGAGATGGAAGAGGCGGCCAGGCTACTCATGGGTACAGTCCGTCAAGGTCCTCAGAGAAAAAAAGTGACAGAAGGCATATAAGGAAGCAAGGAACTACCGGCCAACATGATAATCCTGGAAGTTTAAACTTCTCGGATAGAATTCAAGATCAAGTTAGGGGCAAATTGTTTACCTCTGGTTCTAGAAATACGCTTGATGAGCAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCAAAAATTCCAACTAGAGGTCTACCTCGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAGAGAAGGAGGAGTGTAGAAGAATTACTTCAAGAATAAGGCAGTTCATTAGAGTGCACCATCATAATTCCCAGTTACAAGATGAACTGCAGAGATCACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCTCTGACATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAGAATCCGGCTCTTCCTCTGGCCATCAAACATAATGTGGATCAGAATGATGCATCTCCCCACAGGAAAAGGCTGCATGTTAAACAAGATGCTGTGGAAGAGTTGAAACAAGATAGATCGAAAATTGGGAATTTGGTTGGAACATCAAGAACCAGGAAGCGGTCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGATGAAGAGAACATTGATGTCCCCCCAAACACTGGAACTGAAGTTACTAGGACCGTCAATTATGAAGGGAAGCACAAGAGAGGAATATGTAATTCTTCTAACAACCTAATTTCAGAAAAGTTTAAGGAATCTAGGATTGAAGTGCCACCAACCAGCATGGCAGCTCATGTGATTGATGAGGAAATTGAGATTGAACTTAATGACAGAACTGATATCACTGAAACTGTAAAAACCCAAAATGAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCTTATGCTTCGCCCACCTTTGATTCCTCGTACTAATTATTCGCGGGTCAGTTCTTCCTCTTGGTATGAAGGTGATGACGAGAATGTGGATGTGGATGGTCTTGACGAAGAGGATGCAGGAGCACATGTGGATATAGTCTAA 1359 0.4275 MVERKQFKTRLCVLYQKGRCNRNNCSFAHGNVELRRFSASSSGRREYSGNDLRDKLDRRHLSPPRRYSPARDGRGGQATHGYSPSRSSEKKSDRRHIRKQGTTGQHDNPGSLNFSDRIQDQVRGKLFTSGSRNTLDEQLKKVESDINTLQNQKFQLEVYLDESVQEVDSLNSTIQELDAQLCKEKEECRRITSRIRQFIRVHHHNSQLQDELQRSQVRLQRFGDELVSDISRIGASEEDLSIDIVSNGENPALPLAIKHNVDQNDASPHRKRLHVKQDAVEELKQDRSKIGNLVGTSRTRKRSRWNLPAQLNDKDEENIDVPPNTGTEVTRTVNYEGKHKRGICNSSNNLISEKFKESRIEVPPTSMAAHVIDEEIEIELNDRTDITETVKTQNENGVAHEAKSLLLMLRPPLIPRTNYSRVSSSSWYEGDDENVDVDGLDEEDAGAHVDIV* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1529 452 MobiDBLite consensus disorder prediction 86 102 - -
Lan8g1529 452 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 443 IPR045868 GO:0046872
Lan8g1529 452 Coils Coil 160 180 - -
Lan8g1529 452 MobiDBLite consensus disorder prediction 37 115 - -
Lan8g1529 452 MobiDBLite consensus disorder prediction 47 67 - -
Lan8g1529 452 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Lan8g1529 452 Coils Coil 132 152 - -
Lan8g1529 452 Coils Coil 205 225 - -
Lan8g1529 452 Gene3D - 1 36 - -
Lan8g1529 452 SMART c3hfinal6 6 31 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan8g1529 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1529 - - aprc:113858008 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1529 8 22372731 22380744 Lan8g1529 8 22372731 22380744 ECH