Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1520 ATGATAAACACTAAGGGAGAGATCAGAAGGATAGTTATCCTTAACTGCTACACTAATCACATGTTTTCTATCTTCCTTTTGTTCTCATTCTTTATCACTTTTGAGTATTGCTCAGCTAGAGATACCATAACCATTAACAACTCCCTTAAAGATGAGGGAGTGAACACTATTATTTCAGCAGGAGAAAATTTTGAACTAGGCTTTTTCACTCCTAATGGAAGCTCTATTAGCAGAAGATATGTGGGAATATGGTACTACAAGTTGAATCCACAAACAGTTGTTTGGGTTGCTAACCGAAACAATCCACTTCGAGATTCTGGAGGTGCTTTTGTTGTTGCAGAAGATGGAAACCTCAGGGTTTTGGATAAAAATGGAAAATCCTACTGGGGTACAAATCTTGAAAGATCATCTTCACTACACAGGACAGTGAAGTTATTGGACAATGGGAACCTTATTGTATGCAATGGAGACCAAGAAAGTCATTCAGTGAAGATTCTGTGGCAAAGTTTTGCTAATCCAACTGATACATTTCTTCCAGGCATGAAAATGGATGAAACTATAGGTTTAACTTCATGGACAAGTAATGAAGATCCAGCACCAGGGAACTTCTCCTTTGAGCAAGATCAAGGAGAAAAGAATCAGTATATCATATGGAAGAGATCCCTAAGGTACTGGAAAAGCAGTGTGATAGGTAAACTTGTTGGAACAAGCGAGATGTCTTCGGCAATATCTTACTTTCTGTCAAATTTCACCTTGAAAATATCCCCAAACAACTCAGTTCCCTTTATTACTTCATCACTATATAGTGACACAAGGATGGTCATGACACACTGGGGTCAACTTCAGTACCTGAAGTTGGATTCACAGAAAATATGGTCTTTGGTTTGGGTAGAGCCTAGAGATAGATGCAGTGTTTTTAATGCATGTGGAAACTTTGGCAGCTGCAATAGCAAGTACGATTCTATGTGCAAGTGTTTGCCTGGGTTCATGCCTAATTCTATTGAAAGTTGGAACGCGGGAGAATATTCTGGTGGATGCAGCAGGAAAACAAATGTATGTAGTGAGGATGCTAAGAGTGACACATTTCTGAGCTTAAAAATGATGAAAGTAGGGAACCCGGATTCACAATTTAATGCTAAGAATGAAGTGGAATGCAAGTCAGAGTGCCTCAACAATTGCCACTGTTATGCATATTCATATGAAGACACTGAAAAGGGAAGTCAGGGTGATAGTGATAGTGCTGTATGCTGGATTTGGTCTGAGGACTTGAACAATCTTCAAGAAGAGCATGAGCATGGTTGTGACCTGCATGTTCGTGTGGCGTTTTCTGATATAGAATCCACTGGCAGAAGTTGTAGGACTTGTGGCACAAACTTCATTCCATATCCACTTAGCACAAGACCAAAGTGTGGTGACCCTATGTACTTCAGTTTTTACTGCAACACTTCCTCAGGCCAACTCGACTTTGAGATTCCCGGGGGCACCTACCAAGTGATAAGCATAAATCCAGAAACACAGAAATTCTTGATCCACATGAACGATTTATCTAAATGCGAGGGTCAAAGTTCATGGGACAAACTTCTTCGTCTCAACAGGTCATCTCCGTTCCATCTTACTGGTAATTGCTATGCTGATCCAAGCACCTTTACTTCTGGTGCTCCCATGAAACATGGAGTTGAATTAGAATTAAGTTGGGAGGCACCATTAGAGCCAGTTTGCTCTTCAACGTTGGACTGCATGGAATGGCCAAATTCAACTTGCAATACTACAAGTGATGGAAAGAAGAGATGCCTTTGCACTACAAACTTTCTTTGGGATGGCTTCAAATTAAATTGCACTCTGGAAGGGAATCATAGCTACCAAACAGACAAGCATATGTCTTTGCTTGAGATAATTGTAGTCACTTTGACAGCTTTGGTTATCTTAATTCTTCTCTCAAGTACTGTTACATATATATACTTGCGGAAAAGGAATCAGGAAAACACACAAGAAAGCAGGGGATATGTTAAGAAAAAATCAGGGATTAACATGTATGGCAGTGAGAAATATATCAGAGACATGATAGAATCTGGCAGGTTCAAAGAAGATGATGCACAAGCCATAGATATTCCACATTTTCATTTGGAAAGTATTCTTGATGCTACTAATAACTTTGCAAATGTTAACAAGCTTGGACAAGGGGGGTTTGGTCCTGTGTACAAGGGAAAGTTTCCTGGAGGACAGGAAATGGCAGTGAAGAGACTCTCGAGTTGCTCTGGACAAGGTTTAGAAGAATTCAAGAATGAAGTTGTGTTGATCGCCAAGCTTCAACATCGGAACCTAGTTAAACTTCTTGGTTATTGTCTTGAAGAAGATGAGAAGATGTTAATATATGAATACATGCCAAATAGAAGCTTGGATGCTTTCATATTTGACCGGAAGCGGTGTGGTCTATTAGACTGGGATATGCGCCTCAAGATTATTCTTGGTATTGCTCGAGGGCTCCTTTATCTTCATGAAGATTCTAGATTGAGGATTATTCACAGGGACTTGAAAGCAAGCAATATTCTATTAGATGAAGAGATGAATCCTAAAATCTCAGACTTTGGCTTAGCCAGGATATTTGGAGGAAAAGAGACAGCAGCAAACACAGAAAGAGTAGTTGGAACTTATGGGTATATGTCTCCAGAGTATGCACTTGATGGACATTTTTCAGTGAAGTCTGATGTGTTTAGCTTTGGCGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACAGGATTTTATCAAGTAGAACATGAATTGAGTCTTCTAGGATATGCATGGCATTTATGGAAAGTAGACAGGGTCTTGGACTTCATGGACCAAACACTAAGTGATACATGCAATGCAGATGAATGTTTGAAGTATGTGAATGTGGGACTTTTGTGCCTACAAGAAGATCCAAATGAACGACCAACAATGTCAAATGTGGTTTTCATGCTTAGTAGTGAATCAAATACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTCTTAGGAGATGCCTTTCTAGCAGAGCATCTACTTCAAGTAAAATGGAAACATTTTCACGTAATGAATTGACAGTCACTTTAGAAAATGGCAGGTAG 3111 0.3963 MINTKGEIRRIVILNCYTNHMFSIFLLFSFFITFEYCSARDTITINNSLKDEGVNTIISAGENFELGFFTPNGSSISRRYVGIWYYKLNPQTVVWVANRNNPLRDSGGAFVVAEDGNLRVLDKNGKSYWGTNLERSSSLHRTVKLLDNGNLIVCNGDQESHSVKILWQSFANPTDTFLPGMKMDETIGLTSWTSNEDPAPGNFSFEQDQGEKNQYIIWKRSLRYWKSSVIGKLVGTSEMSSAISYFLSNFTLKISPNNSVPFITSSLYSDTRMVMTHWGQLQYLKLDSQKIWSLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFMPNSIESWNAGEYSGGCSRKTNVCSEDAKSDTFLSLKMMKVGNPDSQFNAKNEVECKSECLNNCHCYAYSYEDTEKGSQGDSDSAVCWIWSEDLNNLQEEHEHGCDLHVRVAFSDIESTGRSCRTCGTNFIPYPLSTRPKCGDPMYFSFYCNTSSGQLDFEIPGGTYQVISINPETQKFLIHMNDLSKCEGQSSWDKLLRLNRSSPFHLTGNCYADPSTFTSGAPMKHGVELELSWEAPLEPVCSSTLDCMEWPNSTCNTTSDGKKRCLCTTNFLWDGFKLNCTLEGNHSYQTDKHMSLLEIIVVTLTALVILILLSSTVTYIYLRKRNQENTQESRGYVKKKSGINMYGSEKYIRDMIESGRFKEDDAQAIDIPHFHLESILDATNNFANVNKLGQGGFGPVYKGKFPGGQEMAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVKLLGYCLEEDEKMLIYEYMPNRSLDAFIFDRKRCGLLDWDMRLKIILGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGLARIFGGKETAANTERVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQVEHELSLLGYAWHLWKVDRVLDFMDQTLSDTCNADECLKYVNVGLLCLQEDPNERPTMSNVVFMLSSESNTLPSPKEPAFVLRRCLSSRASTSSKMETFSRNELTVTLENGR* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1520 1036 Pfam Protein tyrosine and serine/threonine kinase 721 987 IPR001245 GO:0004672|GO:0006468
Lan8g1520 1036 SMART blect_4 48 173 IPR001480 -
Lan8g1520 1036 CDD B_lectin 46 173 IPR001480 -
Lan8g1520 1036 Pfam S-locus glycoprotein domain 234 332 IPR000858 GO:0048544
Lan8g1520 1036 Gene3D Transferase(Phosphotransferase) domain 1 794 1000 - -
Lan8g1520 1036 ProSiteProfiles PAN/Apple domain profile. 353 441 IPR003609 -
Lan8g1520 1036 SMART ntp_6 357 440 IPR003609 -
Lan8g1520 1036 CDD PAN_AP_plant 353 441 - -
Lan8g1520 1036 Pfam PAN-like domain 356 425 IPR003609 -
Lan8g1520 1036 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 1033 - -
Lan8g1520 1036 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Lan8g1520 1036 Gene3D Phosphorylase Kinase; domain 1 682 793 - -
Lan8g1520 1036 ProSiteProfiles Protein kinase domain profile. 718 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1520 1036 CDD STKc_IRAK 724 989 - -
Lan8g1520 1036 ProSiteProfiles Bulb-type lectin domain profile. 42 166 IPR001480 -
Lan8g1520 1036 SMART serkin_6 718 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1520 1036 Pfam D-mannose binding lectin 92 184 IPR001480 -
Lan8g1520 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Lan8g1520 1036 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 35 1033 - -
Lan8g1520 1036 SUPERFAMILY Protein kinase-like (PK-like) 702 1017 IPR011009 -
Lan8g1520 1036 Gene3D - 36 171 IPR036426 -
Lan8g1520 1036 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 198 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1520 Lan-Chr8 22238721 22242996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1520 696 1004 Receptor kinase-like Gene Family AT4G23230 58.228 3.98e-121 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan8g1520 PK_Tyr_Ser-Thr 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1520 - - gmx:100775297 1733.77