Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1499 ATGGGGTGTTGTGTCTCAACAAGCAATAGGAGTACTTGTAGCAGCAGGAGCAACGAAGAAAAGGTCTCTCCATCTTGCTTAGAAGTTGGATGCTGTGGGAAAAATAGAGCAGCAAGGAGAACATTATCTGATCATGTTATTTCACTACACCATTTACCATCCATACTCGGTAGGATTTTCACTAATGGAAAGAGCCAGTCTTCTTGCATATTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGGTTGTATGGGAAGATTTCGTGTCCGAAGATACGATCTTTTGTGGTGTCTTTGATGGCCACGGTCCACATGGTCATCTTGTTGCGCGCAAAGTGAGGGATGCCTTGCCATTAAAACTGCTTTCATTTTTGCATTCGCCTGAATTGAAGCAAAATGGAAATGGATCAAGTAAATCTTGCTTCAAAGGGAACATAAAGCCTGATACGGGAGAATCTGAGAAGGATTCCTCTTCCGCGAATGAACTGAATTCTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGGCGCATCCTAATGTGGACTGCTTCTGTAGTGGGAGCACAGCTGTAACTTTAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATTGTAGCAATTCAGTTGACAGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACGCTGCAGAGGTAGAGTATTTGCTTTGCAAGATGAACCAGAAGTTCATATTGTTACCAACGTTGTAGCGGCCAATAAATGGAGCTTTCACGTGGTTGGATTTATGCACCGCCATCTGAAGAATAACTTAGAATAG 888 0.4347 MGCCVSTSNRSTCSSRSNEEKVSPSCLEVGCCGKNRAARRTLSDHVISLHHLPSILGRIFTNGKSQSSCIFTQQGRKGINQDAMVVWEDFVSEDTIFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSPELKQNGNGSSKSCFKGNIKPDTGESEKDSSSANELNSTWREAFMKAYKAMDKELRAHPNVDCFCSGSTAVTLVKQGSNLFMGNIGDSRAIMGSKDSNDSIVAIQLTVDLKPDLPREAERIKRCRGRVFALQDEPEVHIVTNVVAANKWSFHVVGFMHRHLKNNLE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1499 295 SUPERFAMILY PP2C-like 60 267 IPR036457 -
Lan8g1499 295 SMART PP2C_4 51 283 IPR001932 -
Lan8g1499 295 Pfam Protein phosphatase 2C 149 258 IPR001932 -
Lan8g1499 295 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 272 - -
Lan8g1499 295 PANTHER ALPHABET, ISOFORM E-RELATED 1 272 - -
Lan8g1499 295 MobiDBLite consensus disorder prediction 135 163 - -
Lan8g1499 295 ProSiteProfiles PPM-type phosphatase domain profile. 67 295 IPR001932 -
Lan8g1499 295 CDD PP2Cc 66 270 IPR001932 -
Lan8g1499 295 Gene3D - 60 290 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1499 Lan-Chr8 22028632 22030891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1499 1 269 PP2C-type Phosphatase Gene Family AT1G03590 63.941 7.27e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1499 - - lang:109354017 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0466 7 3406773 3410885 Lan8g1499 8 22028632 22030891 LSH
Lan8g1499 8 22028632 22030891 Lan13g0483 13 3561432 3565321 LSH