Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1498 ATGGGGTGTTGTGTCTCAACAAGCAATAGGAGTACTTGTAGCAGCAGGAGCAACGAAGAAAAGGTCTCTCCATCTTGCTTAGAAGTTGGATGCTGTGGGAAAAATAGAGCAGCAAGGAGAACATTATCTGATCATGTTATTTCACTACACCATTTACCATCCATACTCGGTAGGATTTTCACTAATGGAAAGAGCCAGTCTTCTTGCATATTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGGTTGTATGGGAAGATTTCGTGTCCGAAGATACGATCTTTTGTGGTGTCTTTGATGGCCACGGTCCACATGGTCATCTTGTTGCGCGCAAAGTGAGGGATGCCTTGCCATTAAAACTGCTTTCATTTTTGCATTCGCCTGAATTGAAGCAAAATGGAAATGGATCAAGTAAATCTTGCTTCAAAGGGAACATAAAGCCTGATACGGGAGAATCTGAGAAGGATTCCTCTTCCGCGAATGAACTGAATTCTACATGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGGCGCATCCTAATGTGGACTGCTTCTGTAGTGGGAGCACAGCTGTAACTTTAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATTGTAGCAATTCAGTTGACAGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAACGCTGCAGAGGTAGAGTATTTGCTTTGCAAGATGAACCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAAGAGTATGGTGTGATTTCTATACCTGAATTTTTTCACCGGCTGCTAACTGACAAAGATCAATTCATTGTTCTTGCTTCAGACGGGGTATGGGATGTTTTAAGCAATAAGGAGGTGGTTGAGATAGTATGTTCAGCACCAACGCGATCGTCTGCAGCGAGGATTGTGGTAGATTCTGCTGCCCGGGAGTGGAAAAATAAGTATCCTACTTCAAAGATTGATGACTGTGCTGTTGTCTGCTTATTCTTGGATGGGAAAATGGACTCGGAATCTGATTATGATCAACATGGCTTTTCTTCTGCAACAATCCAGAGCAACCGTTCAGGAGGTAATCCAATTGAGTCAGATGATGGACAAAAATCTGAGCCATATTTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGGAACTAATGTAGCAATGTCTGTTGATGTTGAAAATGGAACATCATTAGCTGAAGATCAAAAGTGGTTAGGTTTGGAAGGGGTCACCCGTGTAAACTCATTGGTCCAACTTCCTAGATTTTCTGAGGAAAAACCAAACTCTTGA 1425 0.4281 MGCCVSTSNRSTCSSRSNEEKVSPSCLEVGCCGKNRAARRTLSDHVISLHHLPSILGRIFTNGKSQSSCIFTQQGRKGINQDAMVVWEDFVSEDTIFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSPELKQNGNGSSKSCFKGNIKPDTGESEKDSSSANELNSTWREAFMKAYKAMDKELRAHPNVDCFCSGSTAVTLVKQGSNLFMGNIGDSRAIMGSKDSNDSIVAIQLTVDLKPDLPREAERIKRCRGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFFHRLLTDKDQFIVLASDGVWDVLSNKEVVEIVCSAPTRSSAARIVVDSAAREWKNKYPTSKIDDCAVVCLFLDGKMDSESDYDQHGFSSATIQSNRSGGNPIESDDGQKSEPYLQRNFTVRSSEENGTNVAMSVDVENGTSLAEDQKWLGLEGVTRVNSLVQLPRFSEEKPNS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1498 474 ProSiteProfiles PPM-type phosphatase domain profile. 67 373 IPR001932 -
Lan8g1498 474 MobiDBLite consensus disorder prediction 384 405 - -
Lan8g1498 474 CDD PP2Cc 66 373 IPR001932 -
Lan8g1498 474 Gene3D - 60 375 IPR036457 -
Lan8g1498 474 Pfam Protein phosphatase 2C 150 338 IPR001932 -
Lan8g1498 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Lan8g1498 474 SMART PP2C_4 51 371 IPR001932 -
Lan8g1498 474 SUPERFAMILY PP2C-like 61 375 IPR036457 -
Lan8g1498 474 MobiDBLite consensus disorder prediction 135 163 - -
Lan8g1498 474 MobiDBLite consensus disorder prediction 384 413 - -
Lan8g1498 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1498 Lan-Chr8 22024206 22027222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1498 1 474 PP2C-type Phosphatase Gene Family AT1G03590 65.696 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1498 - - lang:109351819 816.609