Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1488 ATGGCGTCTGGATCATCCGGTCGCAGTAACTCCGGCTCCAAGGGCTTCGATTTCGCTTCCGATAACATCCTCTGTTCCTACGAAGACTACGGCAACAATAGGGATTCCAATTCCAATGGCAATCTCACCGATCCATCTAAGGACTTTCAGAAATCAAGGATGGCAAGGACATCAATGTTTCCTGCCCCTGCTTTTAATCCGCCTGAAGATTCTTTAAATCAAGATGTGATTGCAACTGTAGATAAGAGTATGAAAAAATACACTGATAACCTCATGCGGTTTCTTGAGGGAATAAGTTCAAGGTTATCCCAGTTGGAATTGTATTGTTACAATCTTGACAAATCGATTGGAGAAATGAGATCTGATTTAAATCGTGACCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAGAAGCACATTCAGGAAGTCCACAGGTCTGTACAAATTTTAAGAGATAAGCAAGAGCTAGCTGAGACTGAGAAAGAATTGGCTAAGCTTCAACTTGCTCAGAAAGACTCATCTTCCTCAAGCCATTCACAGTCCAATGAGGAGAGATCTTTGTCTTCTACCACTGATCCCAAAAAAACTGATAATGCATCTGATGCAAACAACCAGCAGTTAGCTCTTGCTCTGCCTCATCAAATTACTCCCCAGCAACAACCAGCGGCACCACCTCCTCAAGCTCCAGCACCAAATATGACCCAAGCCACTCAACAACCTTCTTATTACATGCCGCCAACACATTTGCCCAATCCACAAGCTATGTCTCAGCTCCCCCAGAATCAGTATTTACCTTCTGATCAACAATACCGGGTGGCTCCACAACCAACACCGCCATCTCAAGTAACCCCATCTCCACCCGCGCAACAATTTTCTCAGTATCAGCAGCCACAACAGCAGCAGCAGCAGCAGCAACAATGGCCTCAACAGGTACCTCAACAGGTACAACCTCCACAACCACCTTCTATGCAACAACCTCAAATAAGACCCCCCTCATCAGCTGTCTATCCTTCATACCAACCAAATCAAGCAACAAACCAATCTCCCACAGAAACACTGTCACACAGCATGCCCATGCAAATGCCATATTCCGGGGTTCCTCAGGGAACTAACCGTGCTGATGCCATGCAATATGGATATGGAGGAGGAAGTGGTGGTAGAACAATTTCGCCGCAGCAACCTCAACCCCATCAGATAAAGGGCTCTTTCCCTTCACAACAAGGCGACGGATATGGACCTCCCTCCAGTGCATACATGATGTATGACGGCGAAGGAGGAAGATCACATCATGCACCCCAACAACAACCTCCTCATTATGCTCAAGCTGGATATCCTCCAACTAGTGCTTCCCTTCAGAACCCAAATCATATGGTCAGAAATCCTAACCAGTCACAACATGTACGCAACCATCCCTACAACGAGTTGATTGAGAAATTGGTAAGCATGGGATTCAGGGGTGATCATGTAGCAAGTGTGATACAGAGGATGGAGGAGAGTGGACAACCTATAGATTTCAACTCTGTGCTTGACAGATTGAATGTTCATGGCTCTGTGGGTCCCCAGAGAGGAGGATGGTCTGGTTAA 1587 0.4612 MASGSSGRSNSGSKGFDFASDNILCSYEDYGNNRDSNSNGNLTDPSKDFQKSRMARTSMFPAPAFNPPEDSLNQDVIATVDKSMKKYTDNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDSKLKSLEKHIQEVHRSVQILRDKQELAETEKELAKLQLAQKDSSSSSHSQSNEERSLSSTTDPKKTDNASDANNQQLALALPHQITPQQQPAAPPPQAPAPNMTQATQQPSYYMPPTHLPNPQAMSQLPQNQYLPSDQQYRVAPQPTPPSQVTPSPPAQQFSQYQQPQQQQQQQQQWPQQVPQQVQPPQPPSMQQPQIRPPSSAVYPSYQPNQATNQSPTETLSHSMPMQMPYSGVPQGTNRADAMQYGYGGGSGGRTISPQQPQPHQIKGSFPSQQGDGYGPPSSAYMMYDGEGGRSHHAPQQQPPHYAQAGYPPTSASLQNPNHMVRNPNQSQHVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQPIDFNSVLDRLNVHGSVGPQRGGWSG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1488 528 MobiDBLite consensus disorder prediction 314 328 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 168 201 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 329 372 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 30 52 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 423 442 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 30 48 - -
Lan8g1488 528 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 526 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 169 201 - -
Lan8g1488 528 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 526 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 233 277 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 287 313 - -
Lan8g1488 528 Coils Coil 134 170 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 387 413 - -
Lan8g1488 528 MobiDBLite consensus disorder prediction 217 416 - -
Lan8g1488 528 Pfam UBA-like domain (DUF1421) 473 517 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1488 Lan-Chr8 21964433 21969255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1488 57 184 Trihelix Transcription Factor Family AT5G14540 34.375 3.31e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1488 - - gmx:100782994 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1488 8 21964433 21969255 Lan8g1488 8 21964433 21969255 ECH