Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1485 ATGGGTTGCTTTTATTCCAAGAATTCAGCTGTAGAAGATAGTAGGGAAGGTAACACAAATAAATTTGATGTGAACTCTTGGCGATTGAATTCCCGGAAAAGGGTTGAAGCTGTTAGAGTGAAAGATGAGGTATTAGATATCCATAGTAGTGATGTGAAAGTTTCATTTGTTAACAAGAAAGCCAATAGTTCAATGAAATTGTATGATGATAAAAAAGGAGTGGATAAAATAGAGAAACCTGAATCGGTTTTTGTTAATATTCCTAGTTTTGGAAGGGTTCCAAAGGCTGTTGAAGGAGAAAATGTTGCAGCAGGATGGCCATCTTGGCTTTCTTCTGTTGCTGGTGATGCTATCAAGGGATGGATTCCAAGGAGTGCAAAAACTTTTGAGAGATTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCACATGACCTAACTAACCAAAAGATCGTTGCTTTGAAGAGGGTTCGCTTTGATAATCTTGATCCTGAGAGTGTCAAATTTATGGCAAGGGAAATCCATGTTCTGCGTAGGCTCGACCATCCAAACATAATAAAGTTGGAGGGCTTGATAACATCATCGACATCTCACAGTTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTACAGGACTTGCATCAAATCCTGCCATTAAATTCTCTGAACCTCAGCTGAAATGCTACGTGCAGCAACTTCTTAGTGGATTGGATCATTGTCACAGTCATGGTGTCCTCCATCGTGACATAAAAGGCTCAAATCTTCTCATTGACAATAATGGTGTCTTGAAGATTGCCGATTTTGGTTTGGCAAGTTATTTTGATCCCCATCATAGTGTTCCGATGACTAACCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTCGGAGCAAATCATTATGGAGTTGCAGTGGATTTGTGGAGCGTTGGCTGCATACTGGGTGAACTATATACTGGCAGACCCATTTTGCCAGGAAAAACGGAGGTAGAGCAGTTGCATCGGATTTTTAAACTTTGTGGCTCACCATCTGAGGATTATTGGCATAACTTGCACTTGCCACATTCAACAGCATTCAGGCCTCCACACCATTATAGGCGATATGTTGCTGAAACATTCAAGGAATATCCATATCCTGCTGTGAGGCTCATAGAGACCCTCCTTTCTGTAGATCCAGCACATCGAAGAACAGCAGCTGCTGCTTTGGAAAGTGAGTTCTTTACATCAGAACCTCTAGCTTGTGATCCATCAACTTTGCCAAAATATCCTCACAGCAAAGAGATTGACGCTAAATTGCGGAATGAAACAACAAGAAGGCAAGGAGCCGTTGGAGGTAGGGAGAAAAAGGTTGGCTCAGGAGTTAGACAGGAAAAAGGACTCAGGGCATATGTCACAGCAGCTGACCCAGGCATGTCAATACAGCAAGAGCAACGTTATTCCAGCTCCAAGAACCATAGTGGGTTGCTGAAACCTCATAGAGAGCCCGTTTCTGGATTTCTGGTTTTCCCTCCTCACGAAAAGCCAGAAGATGGTAAAGAAGTGAGAAATAATTTATCTGGGCGTGTCTATAAAAAGCCTTCACATTCAGGTCCATTGGTTCCTGGTTATAGTTGGGCAAAGAGTGGGAGGGAAGTTGATGGTGAAGCTCTTGTTTCAAACAGAGTGAACCTATCAGAACTATCTGGCCTAGTGGCATCTAGGACTATGTCATCTCAAGATCAAGAGGAAAAACCAGTTCACTTGCACCACAGAAAACCAGTTGAGGTAAGAAAATCTCTGGAGTCAACTAGTCGATCAGAATCAAGAAGGCAGGATAAAAAACGGATTGCTGATCGCACTCAAATTGATAGTGGAAAGGTTCCTAGCGAAAAATTAACTCGGGATGGGCATGGGCCTAGGAGAGACAAGATATATATGTCAGGCCCATTACTGGTTCAATCTAACAATATGGATGTGATGCTGAAAGAGCATGATAGAAAGATCAGAGAGTTTTCAAGAAAAGCAAGACTAGACAAGTCAAGAGCAAGAGATGACAAAATCAGTGCCAAAAGAAAGTAG 2076 0.4167 MGCFYSKNSAVEDSREGNTNKFDVNSWRLNSRKRVEAVRVKDEVLDIHSSDVKVSFVNKKANSSMKLYDDKKGVDKIEKPESVFVNIPSFGRVPKAVEGENVAAGWPSWLSSVAGDAIKGWIPRSAKTFERLHKIGQGTYSTVYKAHDLTNQKIVALKRVRFDNLDPESVKFMAREIHVLRRLDHPNIIKLEGLITSSTSHSLYLVFEYMEHDLTGLASNPAIKFSEPQLKCYVQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASYFDPHHSVPMTNRVVTLWYRPPELLLGANHYGVAVDLWSVGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWHNLHLPHSTAFRPPHHYRRYVAETFKEYPYPAVRLIETLLSVDPAHRRTAAAALESEFFTSEPLACDPSTLPKYPHSKEIDAKLRNETTRRQGAVGGREKKVGSGVRQEKGLRAYVTAADPGMSIQQEQRYSSSKNHSGLLKPHREPVSGFLVFPPHEKPEDGKEVRNNLSGRVYKKPSHSGPLVPGYSWAKSGREVDGEALVSNRVNLSELSGLVASRTMSSQDQEEKPVHLHHRKPVEVRKSLESTSRSESRRQDKKRIADRTQIDSGKVPSEKLTRDGHGPRRDKIYMSGPLLVQSNNMDVMLKEHDRKIREFSRKARLDKSRARDDKISAKRK* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1485 691 SUPERFAMILY Protein kinase-like (PK-like) 123 419 IPR011009 -
Lan8g1485 691 MobiDBLite consensus disorder prediction 572 648 - -
Lan8g1485 691 PANTHER CELL DIVISION PROTEIN KINASE 4 677 - -
Lan8g1485 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lan8g1485 691 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Lan8g1485 691 MobiDBLite consensus disorder prediction 671 691 - -
Lan8g1485 691 Gene3D Transferase(Phosphotransferase) domain 1 212 450 - -
Lan8g1485 691 MobiDBLite consensus disorder prediction 579 641 - -
Lan8g1485 691 SMART serkin_6 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1485 691 PANTHER CYCLIN-DEPENDENT KINASE 4 677 - -
Lan8g1485 691 Gene3D Phosphorylase Kinase; domain 1 116 211 - -
Lan8g1485 691 Pfam Protein kinase domain 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1485 691 ProSiteProfiles Protein kinase domain profile. 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1485 691 CDD STKc_CDK9_like 129 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1485 Lan-Chr8 21942137 21949391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1485 121 454 Core Cell Cycle Gene Families AT5G10270 48.286 2.38e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan8g1485 Pkinase 9.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1485 - - gmx:100807590 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1485 8 21942137 21949391 Lan13g0470 13 3458172 3465074 LSH