Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1484 ATGTCTCTCTATAGCTTCTTTTTTTCCCTTCTCATCCTTCACACAAATCTTTTAAGTTCAGTGTCAGCAACTGAATTTGTCTATAACACAGACTTCAACAACACCAATATTCTCCTGCATGGAAATGCCACCATCCAAGACTCCATTCTTACTCTTACTAACCAGACTTATTTCTCCATTGGCCGCGCCTTTTACCCGTATAAAATACCAATGATATCAGCCAACTCTTCTACTCATCTTCCTTTTGCAACTTCTTTTATCTTCTCCATTGCTCCTGTTAAAGACTTACCTACAGCTCATGGTTTTGCTTTCATGTTTTTACCTGTCATGGACATAACTGGCACTCTTTCGGGAAATTATTTAGGCCTTATTAACCGATCCACCTTAGGTAATTCTTCCAACCATGTCTTTGCTATTGAGTTTGATGATTTCAGAAATGAAGAATTCAATGAAATCAATGATAATCATGTTGGTGTTGACTTGAACTCAATGATTTCTTTGTATTCTGAACCTGCTGGGTTCTGGGTTGGAAATGGAAGAGGAAGTGAAAAACTAGAGGAGTTGGAATTGAATAATGGTCAAAACTATCAAGTGTGGATAGAGTTATTGAATTCACAGATAAATGTTACAATGGCTCCTGCAGGGAAAAAGAAGCCTCCAAAGCCATTGATTAGTAAGCCGGTTAACCTTTCAGGGGTTTTGTTGGATGAAATGTATGTAGGATTTTCTGGAGGAACAGGGAGAATGGTAGACATATGTAGAATTTTGGCTTGGAGTTTTAGCAATGCAAACTTTTCAATTGGTGATGCTTTGGCAACCAAAAATTTGCCCTTGTTTGTGCATTCAAAGCGATCGAGATTTAAGTCAAAAGGGTTCATTATAGGTATCATTTTGAGTGCTCTATTTGTCACTGGCTGCGGCGCTACGATGTGTTTACCAAGAACCAAAAGGGAACAGAAGGAAGAAGATGTTGAAGATTGGGAATTGGAGTATTGGCCTCATAGGATTAGCTACCGAGAGATTAGCGCTGCAACGAGGGGGTTTTCAGAAGAGAATGTGATTGGGATTGGAACAAATGGGCAAGTATACAAGGGAGTTTTAAAAGGAGAAGTAGTTGCAGTGAAAAGAATTCATCATGACACACAGAACAGGATGAGAGAGTTTCTAGCAGAGATTTCAAGCATAGGCAGAATGAAACATAGAAACCTAGTTGGTTTAAGAGGATGGTGCAAAAGAAGAAAAGGATATTTGATGCTGGTTTATGATTATATGGAGAATGGGAGCTTAGACAAAAGGACCTTTGGGTGTGAAGAGAGCATGCTGCTAAGCTGGGAAAGAAGGATTAGGATTCTACAAAATGTAGCTTATGGAGTTTTATATCTACATGAAGGTTGGGAAGTTAAGGTCTTACATAGAGACATAAAAGCAGCCAATGTGCTCTTAGACAAGGACATGAATGCCAGATTAGGGGACTTTGGGCTAGCTAAACTGCACAACAAGGAATACTTACCTGAAACAACAAGAGTAATAGGGACTCAAGGGTACATAGCACCAGAGCTAGTTCGAACTGGCCGGCCTTCAACTGCAACCGATGTGTATAGTTTTGGAATATTAATTTTAGAAGTGGTATGTGGGAGAAGACCTATTGTAGCTGATAAGCCTCCATTGACTGACTGGTTATTGTCGCTTATGGACAGTAACGAGTTGTATCGTGCCATTGATGGTCGTCTAAAGGCTCAAAATGGATGCACCATTGACATTGAGGAAGCTGAGAGAGTCCTTCATTTGGGTTTGCTATGCACAGCTTCTGACCCTGGTGTTAGGCCAATAATGAGGCAAGTGGTGAAAGTCTTGAAGGGAATAGAAGATTGTAGGGAAGAGTGCATGCATGTGAGTTTGTTTCAACAAGTAAAATCGGCAGTAATGTGTTCTAGGAGTGCTACAAATTCCCCATATGGAAGTTATTCAACTTTTGAGGAAATTCTGCAGACCAAAATTTATCCTACAATATCTATAAGCGGCTCTTATACTGTCTCACAATTAGAGTCAGAATCAGTGCACCTAAGAAAGCAGGTAGCAACTGTTTGA 2088 0.3989 MSLYSFFFSLLILHTNLLSSVSATEFVYNTDFNNTNILLHGNATIQDSILTLTNQTYFSIGRAFYPYKIPMISANSSTHLPFATSFIFSIAPVKDLPTAHGFAFMFLPVMDITGTLSGNYLGLINRSTLGNSSNHVFAIEFDDFRNEEFNEINDNHVGVDLNSMISLYSEPAGFWVGNGRGSEKLEELELNNGQNYQVWIELLNSQINVTMAPAGKKKPPKPLISKPVNLSGVLLDEMYVGFSGGTGRMVDICRILAWSFSNANFSIGDALATKNLPLFVHSKRSRFKSKGFIIGIILSALFVTGCGATMCLPRTKREQKEEDVEDWELEYWPHRISYREISAATRGFSEENVIGIGTNGQVYKGVLKGEVVAVKRIHHDTQNRMREFLAEISSIGRMKHRNLVGLRGWCKRRKGYLMLVYDYMENGSLDKRTFGCEESMLLSWERRIRILQNVAYGVLYLHEGWEVKVLHRDIKAANVLLDKDMNARLGDFGLAKLHNKEYLPETTRVIGTQGYIAPELVRTGRPSTATDVYSFGILILEVVCGRRPIVADKPPLTDWLLSLMDSNELYRAIDGRLKAQNGCTIDIEEAERVLHLGLLCTASDPGVRPIMRQVVKVLKGIEDCREECMHVSLFQQVKSAVMCSRSATNSPYGSYSTFEEILQTKIYPTISISGSYTVSQLESESVHLRKQVATV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1484 695 CDD STKc_IRAK 354 621 - -
Lan8g1484 695 ProSitePatterns Protein kinases ATP-binding region signature. 354 375 IPR017441 GO:0005524
Lan8g1484 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Lan8g1484 695 PANTHER - 8 663 - -
Lan8g1484 695 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Lan8g1484 695 SUPERFAMILY Protein kinase-like (PK-like) 324 618 IPR011009 -
Lan8g1484 695 SMART serkin_6 348 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1484 695 PANTHER LECTIN RECEPTOR KINASE 8 663 - -
Lan8g1484 695 Pfam Protein kinase domain 349 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1484 695 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Lan8g1484 695 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Lan8g1484 695 ProSiteProfiles Protein kinase domain profile. 348 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1484 695 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 263 IPR013320 -
Lan8g1484 695 Gene3D Transferase(Phosphotransferase) domain 1 424 641 - -
Lan8g1484 695 Gene3D - 22 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1484 Lan-Chr8 21939379 21941776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1484 21 565 Receptor kinase-like Gene Family AT4G04960 54.152 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan8g1484 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1484 - - vra:106754182 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1484 8 21939379 21941776 Lan8g1484 8 21939379 21941776 ECH