Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1477 ATGGCCACTCTTCCCACTTTCATGGCCCCTAACCAACAACACGATCCACTCTTACCCTTTCTATGGTCTATCAAGAAAGTTCTAGAAGGTTCCAGCGGTTCTGATTCTGATCTCAGTAAATTACTCATAAATTGCATCACAAGTTTCAAACACAGTGTCCAGTATCGAAATGATGTTAGATTTCTTAAGATTTGGCTCCTCTATATGGGTGTTAGTGCAGATTTTGATACTGTTTTCAAAGAAATGCTGGATAGCAAAGTATGCGTCAATGATTCTTCACTGTATGTGTGGTCTGCTTCTTTTTTCGAATTAAAGGGAAGATTGCGTGATGCCCTCACAATCTATCAGCTTGGCATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAAGCACACACCTTATTTCTCAGTAGAATTTCAGAAATACAGAATGCTGCATCTAGTGAGAAGATTGATGATAAAGAACACATGAAATTGGGGAACAACGACATTAATCCATGGGACACCTCCACAATGAATGATCTATTGAAGAAGATAGATCCTTTAATTGCAAAAGTTGATGGGTATTATTCAAGCACAAAATCTTATGCAGGAAAAGTAGCCTTATCTACTTTGAAGAATTCATCAAGGAATAAAGTTATAGAGATAGGTGGAAACAAGTACCATATCAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATATAAAGCATATGTCAATGGTGATCCTGATGATCTTGTTGCACTAAAGATACAAAAGCCGCCTTTCCCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGAATTTTAGGCAGAGAAAGGTTAAGATATGGTTTGGCTCATAGAGTTCATCTCTACTCTGATTGTAGCATACTCATCTGTGATTATTTAGCTCATGGGACGCTACAGGACGCCATAAACTCATATGCGGTCATAGGAAAATCCATGGAAGAAGTGCTATGTATTTATTACACCACAGAAATGTTACACATGGTTGAAACAATGCATGATGCTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTCACAGAAGATGGTTTCTTGGACCGAAGTGGTTCTTGGCGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATAACACAATGTTTAAAGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAAATGCAAGAGGATAAGCCATGGAAATTTCAGGTAGACACATATGGCCTTTGTGTTGTTGTCCATATGATGTTACACAATTGCTATATGGAAGTTGTCAAGAAAGAATCATCTGATGGGGGCTCCGTGTATCTTCCCAGGCTACCCTTTAAACGTTACTGGAACATTGAGCTGTGGAAGACTTTTTTCACTAAGATGCTAAATCAATACCCTGGCAATGATGATAGAAGATTGCTGCAAGAGTTGAAGAAGTCTTTCCAAGACTATATGAACTCTAATCCCCAGCTTGTGAAGAAACTAAAGGAGTTACTAGCCAAGCAAAGGGCTTCCTTGTGTTCTGCCTAG 1578 0.4011 MATLPTFMAPNQQHDPLLPFLWSIKKVLEGSSGSDSDLSKLLINCITSFKHSVQYRNDVRFLKIWLLYMGVSADFDTVFKEMLDSKVCVNDSSLYVWSASFFELKGRLRDALTIYQLGISRNAEPIEWLKKAHTLFLSRISEIQNAASSEKIDDKEHMKLGNNDINPWDTSTMNDLLKKIDPLIAKVDGYYSSTKSYAGKVALSTLKNSSRNKVIEIGGNKYHIKGCAGQGGFAQVYKAYVNGDPDDLVALKIQKPPFPWEFYMYRQLDQRILGRERLRYGLAHRVHLYSDCSILICDYLAHGTLQDAINSYAVIGKSMEEVLCIYYTTEMLHMVETMHDAGLIHGDFKPDNLLIRYARGDLTEDGFLDRSGSWRDQGLCLVDWGRGIDLHLFPDNTMFKGDCRTSGFRCIEMQEDKPWKFQVDTYGLCVVVHMMLHNCYMEVVKKESSDGGSVYLPRLPFKRYWNIELWKTFFTKMLNQYPGNDDRRLLQELKKSFQDYMNSNPQLVKKLKELLAKQRASLCSA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1477 525 SUPERFAMILY Protein kinase-like (PK-like) 219 503 IPR011009 -
Lan8g1477 525 PANTHER BUB1 KINASE, ISOFORM A-RELATED 151 524 - -
Lan8g1477 525 PANTHER BUB1 KINASE, ISOFORM A-RELATED 10 153 - -
Lan8g1477 525 Gene3D Transferase(Phosphotransferase) domain 1 220 522 - -
Lan8g1477 525 Pfam Mad3/BUB1 homology region 1 11 119 IPR013212 -
Lan8g1477 525 SMART serkin_6 222 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1477 525 ProSiteProfiles BUB1 N-terminal domain profile. 1 157 IPR013212 -
Lan8g1477 525 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 10 153 IPR015661 GO:0007094
Lan8g1477 525 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 151 524 IPR015661 GO:0007094
Lan8g1477 525 ProSiteProfiles Protein kinase domain profile. 222 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1477 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Lan8g1477 525 SMART mad3_bub1_i 8 119 IPR013212 -
Lan8g1477 525 Pfam Protein kinase domain 223 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1477 525 Gene3D - 7 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1477 Lan-Chr8 21879357 21885971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1477 221 385 CBL-interacting serine-threonine protein kinases AT2G26980 28.655 6.64e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Lan8g1477 Pkinase 3.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1477 K02178 - gmx:100802272 876.7