Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1475 ATGGCTAGCAGAGAAATTCTCCATAAGATGAAGGCCAAAGCAGGGTTTGGAACATCAGCACCAGGCACAGGGAAAGGAAAAAGCAAAATGTCAAAACATATTACACATGGTTTCCACTTGGTGAAGGGAAAAGCAGGACATCCTATGGAAGATTATTTAGTTTCAAAATTTAAGCAAGAAAAGGACAAAGAATTAGGCTTGTTTGCTATATTTGATGGTCACTTAGGCCATGATGTTGCAAGCTATTTGCAGGATCACCTTTTTGAAAATATCTTGACACAGCATGATTTCTGGACTGAAACAGAAAGTGCAGTAAAGAGAGCTTATATTGAAACAGATGATAAAATTCTGGAACAAGCACTTATTTTAGGAAGAGGAGGATCAACAGCAGTAACTGCAATACTAATTGATGGTCAGAAACTTGTAGTAGCAAATGTTGGTGATTCTAGAGCTGTTATTTGTGAGAATGGAAAAGCCAAGCAATTATCAATTGATCATGAACCTAGCAAGGAAAAAAAATCTATTGAAAAACGTGGTGGTTTTGTATCAAATATTCCAGGAGACGTCCCTCGTGTAGATGGACAACTAGCAGTAGCAAGGGCTTTTGGTGACAAGAGCTTGAAAATGCATCTTAGTTCAGAGCCTGATGTGTTTGAAGTGGAGATAGATCAACATACAGAATTCCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTGGACTCTATTAGACAAATTAAAGATGCTCAAGCAGCAGCAAAGCACTTAATAGAAGATGCTATTTCCAAGAAAAGTAAGGATGATATATCGTGCATAGTTGTCAAGTTCCAATGA 852 0.3779 MASREILHKMKAKAGFGTSAPGTGKGKSKMSKHITHGFHLVKGKAGHPMEDYLVSKFKQEKDKELGLFAIFDGHLGHDVASYLQDHLFENILTQHDFWTETESAVKRAYIETDDKILEQALILGRGGSTAVTAILIDGQKLVVANVGDSRAVICENGKAKQLSIDHEPSKEKKSIEKRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVFEVEIDQHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEDAISKKSKDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1475 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Lan8g1475 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Lan8g1475 283 CDD PP2Cc 36 282 IPR001932 -
Lan8g1475 283 Pfam Protein phosphatase 2C 46 275 IPR001932 -
Lan8g1475 283 SMART PP2C_SIG_2 50 282 IPR001932 -
Lan8g1475 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Lan8g1475 283 Gene3D - 19 283 IPR036457 -
Lan8g1475 283 SMART PP2C_4 30 280 IPR001932 -
Lan8g1475 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1475 Lan-Chr8 21862366 21886497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1475 24 283 PP2C-type Phosphatase Gene Family AT4G28400 76.154 8.23e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1475 K17506 - gmx:100819846 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1475 8 21862366 21886497 Lan8g1475 8 21862366 21886497 ECH