Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1468 ATGACTGAGTGCAGTGACCCAGAAAACAATAATACCATGATAGTGGAGGGAAGAAAAGATAGCTTGATTAGAACTTGCCCTACTTGTGGTCATCATATCAAATGCCAAGATCAGGGTAGTGGAGTTCATGACTTACCTGGACTACCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTGAGTTCTGATATTCATAAGCTTCATCCACTAATTGATGAGTTCATCCCTACTCTTGAAGGCCAGAATGGAATCTGCTATACTCACCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATCCGTCATTTCTTTCACCGGCCTTCAAAGGCATATACAACAGGAACAAGGAAAAGGAGAAAAGTGCATTCAGATGAGGATGGTAGTGAAACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTGTATATCAGTGCCAACTTGAAAGGTTACAAGAAAATTCTTGTACTTTACACTAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCACCAATACCATCTTGGCAGTGATGAAGAGGAGAAAGAAGGGGAACTAGTAGTGTCCAAAGTTTTCTATCAAACTCAACCTAGACAATGTGGTAATTCTTTAATGAAAGACTCAGTTCCTGGTAAAATAATGAAGGGTCAAATTCTGCATAATGAGGTAAATATTAACACTAACAAAAATAATGGGTTTGTTGATTACTACAATTCAACTTTCATATCATTTGGTCAAGGGGGTCAACATAGATCAAGCAATGAAGTGATTTCACATTTTCCTACACATGATGGTGCTCCTTTTATTCCTTGA 852 0.3932 MTECSDPENNNTMIVEGRKDSLIRTCPTCGHHIKCQDQGSGVHDLPGLPAGVKFDPTDQEILEHLEAKVSSDIHKLHPLIDEFIPTLEGQNGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYISANLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGNSLMKDSVPGKIMKGQILHNEVNINTNKNNGFVDYYNSTFISFGQGGQHRSSNEVISHFPTHDGAPFIP* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1468 283 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Lan8g1468 283 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Lan8g1468 283 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 282 - -
Lan8g1468 283 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Lan8g1468 283 MobiDBLite consensus disorder prediction 122 142 - -
Lan8g1468 283 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 282 IPR044799 GO:0003700
Lan8g1468 283 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Lan8g1468 283 MobiDBLite consensus disorder prediction 127 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1468 Lan-Chr8 21814485 21816851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1468 24 222 NAC Transcription Factor Family AT4G28500 78.000 6.69e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1468 NAM 5.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1468 - - gmx:100797459 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1468 8 21814485 21816851 Lan8g1468 8 21814485 21816851 ECH