Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1465 ATGGAATCCCACAATGAAGATCATGCAGCCAAAATGCTTCAAGCTCAAACACACATATTGCATCACACTTTCAGCTTCATAAACTCTATGTCCCTTAAGTGTGCAATTGACTTAAGCATACCCGATGTGATACACAAATATGGCCAACCCATGCCACTCTCAATTCTCATTGCTTCATTATCGATCCACCCTTCCAAAACCACCTTCATCTACCGTTTGATGCGAATTTTGACACATTCTGGTTTCTTCTCTCAGCACAAGAAGGATCTTGAAGTGAGTTATGAGCTAACTGATGCATCTAGACTATTGGTTAAGGAGCATTCCTTGAGTGTAACACCTTTCGTGTTAATGGTACTTGATCCATCTTACTTAAGACCGTGGGATCAATTTTCTACTTGGTTCAAAAGTGGTGACCCTACACCGTTTGTCATGGAACATGGGGTGGCATTTTATGATTATATTGACCAAGATCCTAGACACAGTCACATGTTCAATGATGCCATGGCAAGTAATGCAAGACTGGTTTCAAGTATGGTGATTGAGAAGTGCAAGGGAGTATTCAAGGGATTGAAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACAATGGCTATGGCTATTGCTAAGTCATTCCCACAATTGGACTGCATTGTATTTGATCTCCCTCATGTTGTTGCTGGCTTGGAAGGAAGTGACAAGAACCTTAAATATGTCGGTGGGGACATGTTTGAGACAATTCCATGCGCGGATTCCATTTTGTTGAAGTGGATATTGCATAACTGGAATGACGAGGAATGTGTGAAAATACTGAAGAAATGTAAGGAGGCAATGATGAGAGAAGGCAAAGAAGGAAAGGTTATTATTATAGACATGGTGATGGAGAATGAGAAGGTCGTAGATGATGAATCAGTTGAAACAAAGTTGTTCTTTGATTTGCAAATGATGGTGTTTCTCAATGGAAAAGAGAGAAATAAGAAAGAATGGACCAAGCTGTTTTTCTCTGCTGGTTTCACTAACTATAAAATAACTCCACTTCTGGGTTTGAACTCTCTCATCGAGGTTTATTAA 1068 0.4036 MESHNEDHAAKMLQAQTHILHHTFSFINSMSLKCAIDLSIPDVIHKYGQPMPLSILIASLSIHPSKTTFIYRLMRILTHSGFFSQHKKDLEVSYELTDASRLLVKEHSLSVTPFVLMVLDPSYLRPWDQFSTWFKSGDPTPFVMEHGVAFYDYIDQDPRHSHMFNDAMASNARLVSSMVIEKCKGVFKGLKSLVDVGGGTGTMAMAIAKSFPQLDCIVFDLPHVVAGLEGSDKNLKYVGGDMFETIPCADSILLKWILHNWNDEECVKILKKCKEAMMREGKEGKVIIIDMVMENEKVVDDESVETKLFFDLQMMVFLNGKERNKKEWTKLFFSAGFTNYKITPLLGLNSLIEVY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1465 355 Gene3D - 1 103 IPR036388 -
Lan8g1465 355 PANTHER O-METHYLTRANSFERASE 5 355 IPR016461 GO:0008168
Lan8g1465 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Lan8g1465 355 Pfam O-methyltransferase domain 127 337 IPR001077 GO:0008171
Lan8g1465 355 PANTHER ORCINOL O-METHYLTRANSFERASE 5 355 - -
Lan8g1465 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Lan8g1465 355 Gene3D Vaccinia Virus protein VP39 104 355 IPR029063 -
Lan8g1465 355 SUPERFAMILY "Winged helix" DNA-binding domain 10 107 IPR036390 -
Lan8g1465 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 355 IPR029063 -
Lan8g1465 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1465 Lan-Chr8 21789125 21797363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1465 30 342 Monolignol Biosynthesis Gene Families AT5G54160 32.817 1.77e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1465 - K16040 gmx:100807238 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1465 8 21789125 21797363 Lan8g1465 8 21789125 21797363 ECH