Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1463 ATGGCGGGTCCTCTTCTTCTTCGTTCTCTCTGGTCCTCTACTAGAAAACCCTCTCCTTCTCCTTCTTCTCCTTTCATTTCTAAACTCAACTACTTCTCACGCGCCTTCTCCTCCGCCGCCCCCGCCGCCGCCCCTCCCGTCCCCTCTTCCATCAACCCTAGTCACCTCCGCAATGTTGCCGTTATCGCTCATGTCGACCACGGTAAAACAACTCTCATGGATCGACTCCTCCGCCAGTGCGGCGCCGACATCCCTCATGAACGCGCCATGGATTCCATCTCCCTCGAACGCGAGCGCGGCATCACTATTTCTTCCAAGGTTACATCCATTTCTTGGAAAGAATATGAGTTGAATATGGTTGATACTCCAGGACACGCTGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCAATTTTGGTTGTTGATGCTGGTGAAGGTCCACTGGCGCAAACAAAATTTGTCCTTGCAAAGGCCTTAAAATATGGATTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGACCTTCAGTTACTGAGGAAACGTGTAATGAAGTTGAGAGTTCGGTGTTTGATCTATTTGCCAACCTGGGTGCTACAGAGGAGCAACTAGACTTCCCAGTTCTTTATGCTTCTGCTAAAGATGGATGGGCATCCACCACTTTTACCAAGGATCCTCCTGATCAGGCCAAAAATATGTCAAAGTTGCTTGATGCCATTGTTACACATGTCCTTCCACCAAATGCAAGAATTGACGCTCCTTTCCAAATGCTGGTTTCAATGATGGAAAGAGACTTCTATCTTGGGCGAATTTTGACTGGACGCATATATTCTGGGGTTGTTCGTGTTGGTGACAGGGTTCATGGACTACGTAATAACGACTCCGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAAGAAGGGTACAAACATGGTTCCAATTGATTGTGCTGGAGGTGGTGATATAGTTTCAATGGCTGGCTTGGCAAGCCCATCAATAGGCCATACAGTAGCCACTGTGGAGGCTATGTCTGTATTGCCTACAGTTGTATTGGATCCTCCAACAATTTCTATGACCTTTGGAGTAAATGATTCCCCATTGGCTGGTCGTGATGGCACTCATTTGACCGGAGGAAGAATTGGTGACCGGCTTATGGCCGAAGCTGAAACAAACCTTGCCATAAATGTATTGCCAGGCTTATCAGAATCATTTGAAGTTCAGGGAAGAGGAGAGCTACAGCTGGGTATCCTAATTGAGAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCCCCACCTAAAGTCATGTATAAAACTGAAAATGGTCAAAAGCTCGAGCCAGTTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTGGTCATGGAAGCCTTGTCTCATAGGCGGGCTGAAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGGGGACTAGTTGGTTACAGGAGTGTGTTCAGCACTGACACCCGTGGAACTGGATTTATGCATTGTGCTTTCCTTGCATATGAAAAATTCCGAGGCCCTCTTGGCAATGTTAGGAAAGGCGTACTGGTGTCAATGGGTTATGGTACAATCACAGGTCATGCATTGATGAGCTTAGAAGCTCGTGGAACTCTTTTTGTATCACCTGGAATGGAGGCATATGATGGAATGATTGTCGGGGAACACTCAAAGGATACAGATCTTGATATCAATCCTGTGAGAGCTAAAGCACTTAATAATGTGCGTGCTGCTTCCAAGGATGAGAATGTGAAGCTAACTCCTCCTCGCCTTATAACACTTGAAGAAGCTATTGGATACGTAGCTTCGGATGAGCTTATTGAGGTTACACCGAAGTCCATCCGGTTACGGAAGAAATACCTTGATGTTAACAAGCGCAAGACCATGAGTAAAAAACCAAAGGAATGA 1995 0.4576 MAGPLLLRSLWSSTRKPSPSPSSPFISKLNYFSRAFSSAAPAAAPPVPSSINPSHLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSISWKEYELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEETCNEVESSVFDLFANLGATEEQLDFPVLYASAKDGWASTTFTKDPPDQAKNMSKLLDAIVTHVLPPNARIDAPFQMLVSMMERDFYLGRILTGRIYSGVVRVGDRVHGLRNNDSVAEKIEDGKVVKLMKKKGTNMVPIDCAGGGDIVSMAGLASPSIGHTVATVEAMSVLPTVVLDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPVEEVTIEVNDEHVGLVMEALSHRRAEVTDMGPVSGTVGRTRLSLTCPSRGLVGYRSVFSTDTRGTGFMHCAFLAYEKFRGPLGNVRKGVLVSMGYGTITGHALMSLEARGTLFVSPGMEAYDGMIVGEHSKDTDLDINPVRAKALNNVRAASKDENVKLTPPRLITLEEAIGYVASDELIEVTPKSIRLRKKYLDVNKRKTMSKKPKE* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1463 664 CDD BipA_III 363 440 - -
Lan8g1463 664 Gene3D - 54 252 IPR027417 -
Lan8g1463 664 Pfam Elongation factor G C-terminus 453 536 IPR000640 -
Lan8g1463 664 PANTHER ELONGATION FACTOR FAMILY PROTEIN 5 663 - -
Lan8g1463 664 PRINTS GTP-binding elongation factor signature 58 71 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 PRINTS GTP-binding elongation factor signature 98 106 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 PRINTS GTP-binding elongation factor signature 118 128 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 PRINTS GTP-binding elongation factor signature 134 145 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 PRINTS GTP-binding elongation factor signature 170 179 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 CDD BipA_TypA_C 455 535 IPR035651 -
Lan8g1463 664 Pfam Elongation factor Tu GTP binding domain 56 248 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 54 252 IPR000795 GO:0003924|GO:0005525
Lan8g1463 664 SUPERFAMILY Translation proteins 201 356 IPR009000 -
Lan8g1463 664 Pfam Elongation factor Tu domain 2 273 346 IPR004161 GO:0005525
Lan8g1463 664 Gene3D - 446 540 - -
Lan8g1463 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 261 IPR027417 -
Lan8g1463 664 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 5 663 - -
Lan8g1463 664 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 91 106 IPR031157 -
Lan8g1463 664 Gene3D Elongation Factor G (Translational Gtpase), domain 3 364 648 - -
Lan8g1463 664 Gene3D bipa protein 541 656 IPR042116 -
Lan8g1463 664 CDD BipA_TypA_II 259 356 - -
Lan8g1463 664 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 56 656 IPR006298 GO:0005525
Lan8g1463 664 SUPERFAMILY EF-G C-terminal domain-like 455 571 IPR035647 -
Lan8g1463 664 Gene3D Translation factors 254 357 - -
Lan8g1463 664 SUPERFAMILY EF-G C-terminal domain-like 361 444 IPR035647 -
Lan8g1463 664 TIGRFAM small_GTP: small GTP-binding protein domain 57 200 IPR005225 GO:0005525
Lan8g1463 664 CDD TypA_BipA 56 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1463 Lan-Chr8 21763931 21775721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1463 56 179 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 2.04e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1463 K06207 - gmx:100782425 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1463 8 21763931 21775721 Lan8g1463 8 21763931 21775721 ECH