Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1461 ATGATTGTTTTTCATTCACAGGAAGAAAGTAACAATTGGTTGAGGATGCAAGGAAACAATAAGGTGCTACATTCAGCATGTGCAGCATGCAAACATCAAAGAAAGAAATGCAATGAAAAGTGTATATTATCACCTTATTTTCCATCAAGTAGAAGCTGTGAGTTTGATGCTGTTCACAAGGTTTTTGGTGTTAGCAACATAACAAAGTTGGTGAAGAATGTTAGGGTGGAAGATAGAAGAATGGTTGTGGATTCTTTAATATGGGAAGCATGTTGTAGGCAAAGAGATCCTATACAAGGCACTTATGGAGAATATACAAAAATTTGCCATGAATATGAGAAAGTGTTCAATGAACTCCAAATAATCAGAGATCAAAACCACCTAATAATGCAATTGCCCTCTCATCTAGGAGTGAAATCTTCAGAGAAACACAAACCAGAAAGAGTTGATAATGTGCTAAATTATCTCCAAGGGAACAAGAATAATGTTATTATTGATTCTAACATTTATAATAACTATTGCCCTATTTTTTTGCAAGATTATTTGGAGTTAGAGAATATGAAACCAGAAGTTATCCCATCATTTCAGCAGCACTCTCAGCCATACTATGTTGCAGTTTGGCTTTAA 627 0.3461 MIVFHSQEESNNWLRMQGNNKVLHSACAACKHQRKKCNEKCILSPYFPSSRSCEFDAVHKVFGVSNITKLVKNVRVEDRRMVVDSLIWEACCRQRDPIQGTYGEYTKICHEYEKVFNELQIIRDQNHLIMQLPSHLGVKSSEKHKPERVDNVLNYLQGNKNNVIIDSNIYNNYCPIFLQDYLELENMKPEVIPSFQQHSQPYYVAVWL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1461 208 Pfam Lateral organ boundaries (LOB) domain 26 122 IPR004883 -
Lan8g1461 208 ProSiteProfiles LOB domain profile. 25 126 IPR004883 -
Lan8g1461 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 17 166 - -
Lan8g1461 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1461 Lan-Chr8 21745380 21746689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1461 24 111 AS2 family AT1G06280 65.909 3.53e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan8g1461 LOB 5.8e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1461 8 21745380 21746689 Lan8g1461 8 21745380 21746689 ECH