Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1436 ATGGGAAATAATAGCATGTTTCGTTATGCAGATGGAATAGACAAGTTGTTGATGTTGTTTGGAACCTTGGGAAGCCTTGGAGATGGGCTTCAGAACCCTCTAATGATGTATATTCTTAGTGATGTGATCAATGCCTATGGAGACAAGAATAGCATTTTGACAATGCATGATGTTAATAAGTATGCATTGAGGCTTTTACTTGTTGCAATTGGAGTTGGGATTTCTGCTTTTATTGAAGGAGTATGTTGGAAAAGAACTGCAGAGAGACAAGCTTGGAGAATGAGAATGGAATACATGAAATCTGTCCTAAGACAAGAAGTTGGTTTCTTTGACACTAAGAACGTTGGTTCTTCAACAACCTACCAAGTTGTCTCACTCATTTCTTCAGATTCTAATACAATCCAAGTTGCCTTGAGTGAGAAGATACCTTGCTGCATGGCTTACATGTCCACCTTCTTATTCTGTCATATCTTTGCATTTTTGCTTTCATGGAGACTTACATTGGCATCCATACCACTCTCTATCATGTTCATTCTTCCAGCCCTTTTATTCCGGAAGAGCATGTTGGATCTCGCAATGAAAATGATCGAGTCTTATGGTGTCGCTGGTGGGATTGCAGAACAAGCAATATCTTCAATAAGAACTGTTTATTCTTATGTTGGGGAGAATCAAACACTAGACAGATTTAGCAGTGCACTTCAAAAGAATATGAAATTTGGAATAAAGCAAGGCTTTGCAAAAGGGCTGATGTTAGGAAGCTTTGGAGTTATTTACATAAGTTGGGGTTTTCAGGCTTGGGTTGGAACTATGCTAATCACTGATAAAGGAGAAAAAGGTGGTCATGTATTTGTAGCTGGTTTCAATGTCCTCATGGGAGGGCTGAGCATTTTAAGTGCACTTCCAAATTTATCTGCAATCACGGAGGCAAATGTTGCCGTGACTCATCTTTATGAAATGATCGATAGGGTGCCAACTATAGATTCTGAAAATAAAATTGGAAAGGCTTTATCATATGTCAGAGGAGGTATTGAATTTCAAGACATCTACTTCTGTTACCCATCTAGGCCAGAAGTACCAGTGTTGCAAGGACTCAATCTCACTATTCCTGCAGGCAAGAGAGTAGGCCTTGTAGGGGGTAGTGGTTCAGGCAAATCCACCGTCGTTGCACTACTTCAGAGGTTTTATGACCCTGTTGAGGGAGAAATACTCTTGGATGGTCACAAGATTAGTAGACTTCAATTGAAATGGTGGAGATCTCAACTTGGCCTAGTGAATCAAGAGCCTGTTCTTTTTGCTACATCCATAAAAGAGAACATATTGTTTGGAAAAGAAGGGGCTTCAATGGATAGTGTGATAAGTGCAGCTAAATCAGCAAATGCACATGATTTCATTGTCAACTTACCAGATGGATATGAAACTCAAGTTGGGAAGTTTGGAATGTCATTGTCTGGCGGGCAGAAGCAGCGCATTGCGATAGCAAGAGCTTTACTGAGGGATCCAAAGGTTCTCCTGCTGGATGAAGCTACCAGTGCACTTGATGCACAATCTGAAAGAGTAGTACAGGCTGCAATTGATCAAGCTTCAAGAGGAAGGACTACAATCATCATTGCTCACCGCCTATCCACAATACGAATAGCCGACATTATTACAGTCCTTCAAGCAGGGAGAGTGATAGAATCAGGTAGTCATAATGAGCTCATGGAAATGAATGGTGGACAAGGTGGAGAGTATGCTAAAATGGTTGAGTTGCAGCAAGTAACAACTCAGAATGATGAATCTAAAACTTCCGATACTCAAGTCGAGGGAAGGAGGAGTTCCCATAATCACAGCCACAGGATGAGTGGTATTCCCCTGAGCCCAGGAGTAAGTTTCAAATCAAGCACACAAGGCACTCCAATGTTATCTCCCTTCAGCCAAGGACTTTCCATGGGCACACCATACTCTTATTCGATCCAATATGACTATGATGATGACTGTTTTGAAGATAACTTGAAAATAACAAATTATCCAACTCCTTCACATTGGCATTTGCTGAAAATGAATGCACCTGAATGGGGAAGTGCAGTGTTTGGAGTCTTGGCAGCAATAGGTTCAGGAGCAGTACAACCAATACATGCATACTATGTAGGAGTACTTATATCATTTTACTTTGAACCTGAAAACTCCAAGATGAAGTCTAAAACTAGAACCTTGGCCCTCACTTTCTTAGGAATTGGTGTTTTTAACTTCTTCGCAAGCATTCTCCAACACTATAATTTTGCAATTATGGGAGAGAGGTTGACTAAAAGAATAAGAGAGAAAATACTAGGAAAGTTGATGACATTTGAGGTAGGGTGGTTTGATAGTGTAGATAACACAAGTGCAGCCATTTCTGAAAGATTATCCTCCGATGCAAACTTGGTTCGTTCTCTAGTTGGGGACCGTATGTCATTGTTGGCACAAGCTGTTTCTGGATCTGTCTTTGCTTACACTCTAGGACTTTTCCTCACATGGAGGCTGTCCCTAGTGATGATTGCAGTGCAGCCAATAGTCATTGGAAGCTTTTATTCAAGAAGTATCTTGATGAAGAGTATGGCCGAAAAATCGCGCAAAGCACAACGTGAAGGAAGCCAACTTGCAAGTGAAGCTGTTATAAACCACAGAACCATAACTGCCTTCAGTTCTCAGAAAAGAATGTTGGCACTTTTCAAATCCACATCGGTAGGCCCTAAAAAGGAGAGTATTAGGCAGTCATGGATTTCAGGCCTTGGTCTTTTCGGCTCACAATTTTTTAACACTGCATCAACAGCATTAGCTTATTGGTATGGTGGGAGGCTCCTGGTAGATAACCTTATAGAACCAAAGCATCTCTTCCAAGCATTTTTAATACTTCTCTTCACTGCATACACTATTGCAGAAGCTGGAACCATGGCTTCTGACATATCTAAAGGAAAAAGTGCAGTTGGATCAGTTTTTTCTATCCTCGAAAGGAACACTGAGATTGATCCTGATACTTCATGGGGAGCAAACAAGAAAAGGAAAATAAGGGGCAGTGTTGAGCTTATAAGTGTGTTCTTTGCATATCCAACTAGACCAGACCATATGATATTGAAGGGTATGTATCTTAAAGTTGAGGCTGGGAGACAAGTAGCACTAGTTGGGCACAGTGGTAGTGGTAAGTCCACTATTATTGGTCTTATTGAAAGGTTTTATGATCCTTTGAAGGGAACAGTGTGCATAGATGAGCAAGATGTCAAGTCCTATAATTTGAGAATGCTGAGATCACATATTGCATTGTTAAGTCAGGAGCCAATCCTTTTCGCTGGAACCATTCGAGAAAACATTGCCTATGGGAAAGCAAATGCAACTGAATCCGAGATAAGAAAGGCTGCTGCTATGGCTAATGCTCATGAATTCATAAGTGGAATGAAAGATGGGTATGAAACATATTATGGAGAAAGAGGAGTTCATCTATCAAGAGGTCAGAAACAAAGAATAGCCTTAGCTAGAGCCATAATAAAGAACCCAACAATTCTGCTTCTGGATGAGGCTACAAGTGCACTTGACAACGTATCAGACAAGTTGGTCCAAGAAGCACTAGAGAAAATGATGGTTGGAAGAACATGCATAATTGTGGCACATAAACTATGTACTATACAACAGTCCAATAACATTGTTGTGATTAAGAATGGGAAGGTTGTGGAACAAGGGTCACATAATGAATTGATTTCACTTGGACATGAGGGTGCATATTGTACTCTTGTTAAACTTCAAGGTGGTAACTCTCCTAGGTAA 3774 0.4059 MGNNSMFRYADGIDKLLMLFGTLGSLGDGLQNPLMMYILSDVINAYGDKNSILTMHDVNKYALRLLLVAIGVGISAFIEGVCWKRTAERQAWRMRMEYMKSVLRQEVGFFDTKNVGSSTTYQVVSLISSDSNTIQVALSEKIPCCMAYMSTFLFCHIFAFLLSWRLTLASIPLSIMFILPALLFRKSMLDLAMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLDRFSSALQKNMKFGIKQGFAKGLMLGSFGVIYISWGFQAWVGTMLITDKGEKGGHVFVAGFNVLMGGLSILSALPNLSAITEANVAVTHLYEMIDRVPTIDSENKIGKALSYVRGGIEFQDIYFCYPSRPEVPVLQGLNLTIPAGKRVGLVGGSGSGKSTVVALLQRFYDPVEGEILLDGHKISRLQLKWWRSQLGLVNQEPVLFATSIKENILFGKEGASMDSVISAAKSANAHDFIVNLPDGYETQVGKFGMSLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQAAIDQASRGRTTIIIAHRLSTIRIADIITVLQAGRVIESGSHNELMEMNGGQGGEYAKMVELQQVTTQNDESKTSDTQVEGRRSSHNHSHRMSGIPLSPGVSFKSSTQGTPMLSPFSQGLSMGTPYSYSIQYDYDDDCFEDNLKITNYPTPSHWHLLKMNAPEWGSAVFGVLAAIGSGAVQPIHAYYVGVLISFYFEPENSKMKSKTRTLALTFLGIGVFNFFASILQHYNFAIMGERLTKRIREKILGKLMTFEVGWFDSVDNTSAAISERLSSDANLVRSLVGDRMSLLAQAVSGSVFAYTLGLFLTWRLSLVMIAVQPIVIGSFYSRSILMKSMAEKSRKAQREGSQLASEAVINHRTITAFSSQKRMLALFKSTSVGPKKESIRQSWISGLGLFGSQFFNTASTALAYWYGGRLLVDNLIEPKHLFQAFLILLFTAYTIAEAGTMASDISKGKSAVGSVFSILERNTEIDPDTSWGANKKRKIRGSVELISVFFAYPTRPDHMILKGMYLKVEAGRQVALVGHSGSGKSTIIGLIERFYDPLKGTVCIDEQDVKSYNLRMLRSHIALLSQEPILFAGTIRENIAYGKANATESEIRKAAAMANAHEFISGMKDGYETYYGERGVHLSRGQKQRIALARAIIKNPTILLLDEATSALDNVSDKLVQEALEKMMVGRTCIIVAHKLCTIQQSNNIVVIKNGKVVEQGSHNELISLGHEGAYCTLVKLQGGNSPR* 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1436 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 584 IPR027417 -
Lan8g1436 1257 Gene3D - 341 597 IPR027417 -
Lan8g1436 1257 SUPERFAMILY ABC transporter transmembrane region 676 990 IPR036640 GO:0005524|GO:0016021
Lan8g1436 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 308 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g1436 1257 Gene3D ABC transporter type 1, transmembrane domain 65 983 IPR036640 GO:0005524|GO:0016021
Lan8g1436 1257 Pfam ABC transporter transmembrane region 690 961 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g1436 1257 Pfam ABC transporter transmembrane region 18 293 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g1436 1257 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 10 1252 - -
Lan8g1436 1257 CDD ABC_MTABC3_MDL1_MDL2 343 584 - -
Lan8g1436 1257 MobiDBLite consensus disorder prediction 586 620 - -
Lan8g1436 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 343 579 IPR003439 GO:0005524
Lan8g1436 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 678 994 - -
Lan8g1436 1257 CDD ABC_MTABC3_MDL1_MDL2 1012 1251 - -
Lan8g1436 1257 SUPERFAMILY ABC transporter transmembrane region 7 324 IPR036640 GO:0005524|GO:0016021
Lan8g1436 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 316 - -
Lan8g1436 1257 Pfam ABC transporter 361 510 IPR003439 GO:0005524
Lan8g1436 1257 Pfam ABC transporter 1030 1179 IPR003439 GO:0005524
Lan8g1436 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 689 976 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan8g1436 1257 SMART AAA_5 370 556 IPR003593 -
Lan8g1436 1257 SMART AAA_5 1039 1225 IPR003593 -
Lan8g1436 1257 Gene3D - 998 1254 IPR027417 -
Lan8g1436 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1012 1248 IPR003439 GO:0005524
Lan8g1436 1257 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 1252 IPR039421 -
Lan8g1436 1257 ProSitePatterns ABC transporters family signature. 482 496 IPR017871 GO:0005524
Lan8g1436 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1251 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1436 Lan-Chr8 21506432 21512013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1436 6 1251 Calmodulin-binding Proteins AT2G36910 41.760 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1436 K05658 - gmx:100789562 2034.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1436 8 21506432 21512013 Lan8g1436 8 21506432 21512013 ECH