Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1430 ATGCCAACAGTGTGGTTTTCTTTGAAGAAGTCTCTACACTGCAAATCTGAGCCAAGTGATGTACATGACCCAAAATCAAGGAAGCATTTGAGTACAATCTTGACTAAGAAAACAGGAAGATCAGGGTGTTCAAGGTCCATAGCAAATCTCAAAGATGTTATCCATGGAAGCAAGAGGCATATTGAGAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCTATAACTCATGAGGTGATTTTGAGTAACTCAAGGTGTGAGTTGAAAATCACTGGTGGTGGTGCTAGTGGTGGTTCAACATTTGTAGGTACTTTGAGGCCTGGGACTCCTGGTCCTGGAGGGCACCCTACAATGCATTACTTTAACCCCTCATTTAGGACTTCATCTACTCCTCCAAGGAAATCTCCTTTCCTTTTGTCAGAAGGGTCCACTTTTCATGGTGCTGGAGCTGGACTTCATTCAAGTAATAGAATGTCTCTTGAGACAGATTCAAATGGTTCTTCAACTGTGACTTGCCACAAATGTGGAGAGCAATTTAACAAATGGGAAGCTGCTGAATCTCATCATCTATCCAAGCATGCTGTTTCATGTATTATAAATTTAAGAGCAAGTTTTCCCTTGACAGTTACTGAACTTGTGGAAGGTGATTCATCAAGGAAAATAGTGGAGATCATATGCAGAACAAGCTGGTTAAAGTCTGAGAACCACTGTGGTAGAATTGAGAGAGTTTTGAAAGTCCACAACATGCAAAAGACATTGGCTAGATTTGAAGAGCACAGAGAGATGGTAAAAATCAAAGCAAGTAAACTCCAGAAGAAGCATCCTAGGTGCCTGGCTGATGGAAATGAGCTTTTGAGGTTCTACGGCACCGCTGTCGCATGCTCTCTCGGTCACAATGGCTCTTCAAGTCTCTGCCTATCAGAAAAATGTTGTGTGTGTAGAATCATCAGAAATGGTTTTTCTGCCAAGAAGGAGCTCAAGGATGGCATAGGTGTTTTCACAACATCAACAAGTGGAAGAGCTTTTGAGTCTATAGAGATTCTTGGTGATGATCCTTCACTAAGAAAAGCACTTATTGTTTGCAGAGTAATTGCTGGCAGGGTTCATAGGCCTTTAGAAAACATTCAGGAAATTGCAGCCCAAACAGGCTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGTTTTGTAGTAATTTGCAAACCATGA 1275 0.4173 MPTVWFSLKKSLHCKSEPSDVHDPKSRKHLSTILTKKTGRSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGGGASGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSTFHGAGAGLHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAESHHLSKHAVSCIINLRASFPLTVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEHREMVKIKASKLQKKHPRCLADGNELLRFYGTAVACSLGHNGSSSLCLSEKCCVCRIIRNGFSAKKELKDGIGVFTTSTSGRAFESIEILGDDPSLRKALIVCRVIAGRVHRPLENIQEIAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1430 424 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 100 - -
Lan8g1430 424 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 101 424 - -
Lan8g1430 424 MobiDBLite consensus disorder prediction 103 123 - -
Lan8g1430 424 Gene3D - 210 423 - -
Lan8g1430 424 SUPERFAMILY ADP-ribosylation 215 423 - -
Lan8g1430 424 Coils Coil 259 279 - -
Lan8g1430 424 PANTHER - 101 424 - -
Lan8g1430 424 PANTHER - 2 100 - -
Lan8g1430 424 ProSitePatterns Zinc finger C2H2 type domain signature. 178 199 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1430 Lan-Chr8 21444601 21447017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1430 1 424 C2H2 Transcription Factor Family AT5G54630 65.828 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan8g1430 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1430 - - lang:109355134 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1430 8 21444601 21447017 Lan8g1430 8 21444601 21447017 ECH
Lan7g0554 7 4184827 4187129 Lan8g1430 8 21444601 21447017 LSH