Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1429 ATGAAAGAAGAGTCAATAGGATTGATTATTGGGGGTTCCACAGGTGTTGTTATTGGAGTCATTTTGGCAGTTTTTGCACTCTTCTGCTTTAGGTACCATCAAAAGCATTTACAGATAGGTAATAGCAGTTCCAGAAGGGCTGCTACCATACCGATTCGAACAAATGGTGCCGACTCTTGCACTATTCTATCAGACTCAACCATAGGTACAGAGTCACCATTAAAGTCTGGATGGAATGGCATGTCGTTTTGGCTTGATGGATTTAAGAAGAGTCACATGGTTTCGGCATCTGGACTACCTGAATATTCATACAAGGATTTGCAGAAGGCAACATATAATTTTACTACAGTAATAGGACATGGTGCATTTGGTCTTGTTTATAAAGCTCACATGTCTACCGGTGAGACTGTTGCGGTTAAGGTTCTTGCAACTAATTCTAAGCAAGGAGAGAAAGAATTTTATACAGAGGTTATGTTGTTGGGGAGGTTACACCATAGAAATCTGGTGAATTTGATTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTTTACATGAGCAAGGGTAGCTTAGCTTCTCACTTATATGGAGAAGAGAATGAAGCACTGAGCTGGGATATGAGGGTTGACATAGCTTTAGAAGTAGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCGGTAATCCATCGAGATATCAAATCTTCCAACATTTTGTTGGACCAGTCCATGCGTGCCAGGCAGGTTGCTGATTTTGGACTATCAAGAGAGGAGATGGTGGGTAAACATGCAGCTATTCGCGGTACCTTTGGTTATCTTGATCCCGAGTATATATCTTCCAGGAAATTCACCAAGAAAAGTGATGTGTATAGTTTTGGTGTGTTGCTCTTCGAAATTATAGCTGGAAGAAACCCTCAGCAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAATACCGAGGAAAAAGTTGGTTGGGAAGAAATTGCAGATTCTCGCCTCGAAGGAAATTTCGATGTCCAAGAGCTGAATGAAGTGGCAGCCCTTGCCTACAAGTGTGTTAATCGCGCCCCAAGGAAGCGCCCTTCAATGAGGGATATAGTGTCAGTGTTAACAAAGATCCTTAAATCAAGGCACCATAGGAATCATCACAACAAGGCCTTGTTATCCACAGCAGAAGTTTTCATTGATCTTGATCAGACAGAGACCAAGAATTCTGTTTCTAACCACCGGAGACAAGATTCAATGGATAGTGCAACAGACATTGAAGTGTAG 1287 0.4204 MKEESIGLIIGGSTGVVIGVILAVFALFCFRYHQKHLQIGNSSSRRAATIPIRTNGADSCTILSDSTIGTESPLKSGWNGMSFWLDGFKKSHMVSASGLPEYSYKDLQKATYNFTTVIGHGAFGLVYKAHMSTGETVAVKVLATNSKQGEKEFYTEVMLLGRLHHRNLVNLIGYCAEKGQHMLVYVYMSKGSLASHLYGEENEALSWDMRVDIALEVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARQVADFGLSREEMVGKHAAIRGTFGYLDPEYISSRKFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNTEEKVGWEEIADSRLEGNFDVQELNEVAALAYKCVNRAPRKRPSMRDIVSVLTKILKSRHHRNHHNKALLSTAEVFIDLDQTETKNSVSNHRRQDSMDSATDIEV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1429 428 SUPERFAMILY Protein kinase-like (PK-like) 101 383 IPR011009 -
Lan8g1429 428 MobiDBLite consensus disorder prediction 407 428 - -
Lan8g1429 428 Pfam Protein tyrosine and serine/threonine kinase 114 375 IPR001245 GO:0004672|GO:0006468
Lan8g1429 428 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 7 401 - -
Lan8g1429 428 ProSiteProfiles Protein kinase domain profile. 112 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1429 428 SMART serkin_6 112 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1429 428 PANTHER OS01G0253100 PROTEIN 7 401 IPR045271 GO:0004714|GO:0006468
Lan8g1429 428 CDD STKc_IRAK 118 378 - -
Lan8g1429 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lan8g1429 428 Gene3D Transferase(Phosphotransferase) domain 1 188 401 - -
Lan8g1429 428 MobiDBLite consensus disorder prediction 408 428 - -
Lan8g1429 428 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Lan8g1429 428 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1429 Lan-Chr8 21436868 21441579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1429 102 375 Glycoside Hydrolase AT3G07070 46.048 4.95e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan8g1429 PK_Tyr_Ser-Thr 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1429 - - gmx:100799586 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1429 8 21436868 21441579 Lan8g1429 8 21436868 21441579 ECH
Lan7g0555 7 4191331 4195885 Lan8g1429 8 21436868 21441579 LSH