Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1422 ATGGCAGATGATAATCAATTTCAAGGAAGTGGAAACTGGTGGGAATCATCAAGGAACATGAGGTTTGAAAGTGGGGATCAATCACAGTCTTCATCATCTGGACTCACCAACATAGGTAACTTTTGTTGGCAGCAACAACAACATGACATGGTTGTGGATCACATGAAGCCAAGGTCTAGTTCTTCCATGGAAGGAACTACTTCTGTGCAGGTTTTCCATGATAAGCTTCAACAACAACAACAAGATTCTTGTGCCACTAATTCCACCAATGACCACAACAACTTGCATATGATGGGTTTGGGACTTTCATCTCAAGCCATGGATTGGAATCAAGCATCTTTGCTAGGTGAGAAAGCTTCAGAGAGCAGCTTCAGGTCCATGCTGCAAGAAAATTTGAGTTCATCAAACACTAATTTTCAGCATGAAACTGGGATTGGATTGTCTCAACAAGTTCAATGGAGACCAGAACCTTCTTCCACCAATGAATTCAAACAAGTGAATAGAGGTTTCTCTTTGGATCAAACTCAATTTAGCCCTCAATATAGCTCTGGGGATAGTAACGTAACAAGCCAAGGTATACCCTCTACTTTTCACACGGATCATTACCCTTCAGTGTTACAAGGACTATTAGGACCTGAAAGCAATCAACAAGGTTCATTTGAGAATATTCGACCCATGAGTTTTCCATATTCACCAAGTTATGGCTTGAACTCTAATGAGTTAATACCTTCTTGGCCTGGTTCTAAAGTTCCTCAGTTCTTGAGAGCTTCACCTCCTAAACAACCACCTATTCCTAATAGTAACCAGTTGCATTTCACCAACAACGCTCCCTTTTGGAACGCTTCTGAGGCTCCTATTAAAGATGCTCGACCCAGCTTCTTCCCATCATTGCAACAACCATTTTCCACGCCAAGTTTTGATGTTCAGTCAAAGCAGAATATATCTGAAGTTAGGGACTCCGGTGCTGTGATGAAGAAAAGTGGGAGTGAGCCTCCACCCAAAAGGCCCAGGAATGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTACAACAATTGGTTGCGCCTTTTGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCCATTGAATACATCAAATTTCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCCACACTGCATCAACAGAATTCTGGTAACTCTAAGGAAGGTGAGGGACCAAAGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTCCCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCACAGTTGATTTTTGGACACCAACATTTGGAGGAACTTACAGATAA 1377 0.4256 MADDNQFQGSGNWWESSRNMRFESGDQSQSSSSGLTNIGNFCWQQQQHDMVVDHMKPRSSSSMEGTTSVQVFHDKLQQQQQDSCATNSTNDHNNLHMMGLGLSSQAMDWNQASLLGEKASESSFRSMLQENLSSSNTNFQHETGIGLSQQVQWRPEPSSTNEFKQVNRGFSLDQTQFSPQYSSGDSNVTSQGIPSTFHTDHYPSVLQGLLGPESNQQGSFENIRPMSFPYSPSYGLNSNELIPSWPGSKVPQFLRASPPKQPPIPNSNQLHFTNNAPFWNASEAPIKDARPSFFPSLQQPFSTPSFDVQSKQNISEVRDSGAVMKKSGSEPPPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVAPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPTLHQQNSGNSKEGEGPKQDLRSRGLCLVPVSSTFPVTHEPTVDFWTPTFGGTYR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1422 458 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Lan8g1422 458 CDD bHLH_AtbHLH_like 344 395 IPR045239 -
Lan8g1422 458 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 447 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 303 345 - -
Lan8g1422 458 SMART finulus 349 393 IPR011598 GO:0046983
Lan8g1422 458 MobiDBLite consensus disorder prediction 303 317 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 209 224 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 402 417 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 402 424 - -
Lan8g1422 458 Gene3D - 348 404 IPR036638 GO:0046983
Lan8g1422 458 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 447 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 175 224 - -
Lan8g1422 458 MobiDBLite consensus disorder prediction 175 202 - -
Lan8g1422 458 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 400 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1422 Lan-Chr8 21285909 21288853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1422 116 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.310 2.65e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1422 - - lang:109352127 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1422 8 21285909 21288853 Lan8g1422 8 21285909 21288853 ECH