Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1420 ATGTCTGTGCTCCTGGATGTCTTCCTAGTTCGTAGCACTACTTCATTTGTAGTAATTACCAATTCCAAATACAAGAAATCTGCAAACTTGTCTCAGAAAACCAATATGAAACTACAAGACTCATCTCTTGGTCTTTTCAAACTGCTGATTATGTTGTGTCTTACTTTGCAGTCCACAAACGCAATCACCTATTATGAAACCTTACAAATGGGCCAATCAATCAGTACCTCAGACACTATTGTGTCTGCTGAAGGGAACTTCGAACTGGGTTTCTTCTCTAAGAACTCGACCGAGTATTTTGTAGGAGCATGGTTTAAGAAGATTCCTGGTAACAAGATTGTTTGGGTTGCAAACAGAGATAATGAATTCACAGGCTCCTCTGCCATTCTTACAATATATAAAGATGGTAATCTTGTGATTATGCAAGACGAATTGCTATTTTTCATGACCAACATCTCTAGTAAGAGCAATAGTACTAGTACACATGCCATGCTCTTGGATTCAGGTAACTTCATACTGTTGAATGACTTGACTTTAGAGATTTTATGGCAGAGTTTTAAATATCCTACAAATACCCTTTTGCCTGAGATGAACATAGGGGTTGGCTCAGTATCAGGAGACCCTTGGTCACTGAGATCATGGACAAGTCCAAATGATCCTCGTACTGGTTTTTTCTCCTTAGAAGTAGTTGAGAATTTCGGCTCGTGGTTGCTAGTAATCAAGAGGAATTCTGTCACATACTGGATTGGTGATCAATCATCTAATTTTACACTTGGAAATTTTAAACGTGGCAATGATGTCTGGTTTAACTTAAGGATGACCTTGTCTATCACTTGGCAGGGTGAATATGGTTCTCTTCTGGAGCTAGAAGTATCCGGGGAGCTCAATCAACTGTCTTGGTCAGACAATGACAAACAATGGATTTCTATCCAGTCATCAAAGTGTGGGACAAGGGCTTTATGTGGGAACTTTGGTGTTTGCAATCCACAAGCCATGATCCCATGTGATTGTGTACCTGGTTTTGAACCGAACGACCCGAGTTCTTGGATGAAAGGTAAAACATCAGCTGGCTGTGTGAGGAAAAAGCCGTTGCTCTGCAGCAACACTAGCAGTGATGGTTCCACTGATGGATTTATTCTTATCAAGGCAGTTGACTTTCCACCAAATGATTCACTCATCTTGAACACTCCGAATGCATTAATATGTCGAACAACTTGTTCTGGCAACTGCTCTTGCCTGGCCTATGCTTATAATTCTCAAAGTCAGTGCTTGTTATGGCATGATCATGTCTTGGATCTGAAGAACATCTCAGTTGATGTTGGATATGCTGATAATCAACGACCAAGTTTCTTTCTCAAACTTGCTGCCTCTGAAATAAAAAATGAGTTGAACACAGGGAATAATCTGGGACATAAGTCCAACAGCAGCAAGAAACTATCAAAAATTGGCATATTTGTCGCAGTTGCGGCAATGCTTATACTAGGCCTCTTTGTTTACTTCTACTATAAGTGGAAAAAGCTAAGGGGGTCAGGGGAGGACCTTCTACAGTTTGATGTAGGCATGGGCATGAAAGTTGAAAGCTCTGATCATAATGAAGCAGATAAGATTGAAAAAGTTGACAAGAGGGAAGTCAAATTGCCTTTTTTCAGTTTTACAAGTGTTTCTGCAGCAACTGATAACTTTTCAGCTGAAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTATAAGGGAAAGCTGTTGAATGGGGATGAGGTAGCTGTAAAAAGGTTGTCTAAAAGATCAGGCCAAGGATGGGATGAGTTAAAAAATGAAGCAATGCTCATTGCAAAACTCCAACACAACAACCTTGTTAGGCTTTTAGGCTGCTGCGTTGAACGAGATGAAAAGATGCTAATTTATGAGCTTATGCCAAATAAAAGCTTAGACTTTATCCTTTTTGATGCCTCAAAAAGCATGATGCTAGATTGGGAAACTAGAGTTCGAATAATTGAGGGGATAGCCCAAGGTCTTCTCTATCTTCATCAGTATTCAAGGTTAAGGATCATTCACAGAGATTTAAAAGCTAGCAACATACTGTTGGATATCAAAATGAATCCAAAAATATCAGATTTCGGAATGGCAAGAATGTTTGGTGGAAATGAAGTAGAAGCAAATACGAACCGGATAGTTGGGACATATGGCTACATGTCCCCTGAATATGCTTTGGAAGGCCTTTTTTCAGTAAAATCGGACGTGTTCAGTTTTGGAGTCCTTTTCTTAGAGATTATGACAGGCAAGAAGAACACCGGTTTTTATAACATGAATTCCCTCAATCTTCTCGCATATGCATGGGGTCTATGGACAACTGGTAGAGCAATAGAAATGATGGATCCTGTGCTAAAATATGCCTCCAATAAGCAAAATATGATGATAAGATATGTGAACATAGCATTCCTTTGTGTTCAAGAATATCCAGCTGACAGACCTGTCATGTCTGATGTTGTATCCATGCTTAGCAATGAAAATGTTGTTTTGCCTTGTCCCAAACCACCTGCATTTCTATATGCGAGAGGTACGAAGAATTCAAGCTCGGTCGGAAGTTCCACAGGAAATGTTTCTTTGAATATCATGACAGCCTCTGTTATTGAAGCAAGATAA 2640 0.3973 MSVLLDVFLVRSTTSFVVITNSKYKKSANLSQKTNMKLQDSSLGLFKLLIMLCLTLQSTNAITYYETLQMGQSISTSDTIVSAEGNFELGFFSKNSTEYFVGAWFKKIPGNKIVWVANRDNEFTGSSAILTIYKDGNLVIMQDELLFFMTNISSKSNSTSTHAMLLDSGNFILLNDLTLEILWQSFKYPTNTLLPEMNIGVGSVSGDPWSLRSWTSPNDPRTGFFSLEVVENFGSWLLVIKRNSVTYWIGDQSSNFTLGNFKRGNDVWFNLRMTLSITWQGEYGSLLELEVSGELNQLSWSDNDKQWISIQSSKCGTRALCGNFGVCNPQAMIPCDCVPGFEPNDPSSWMKGKTSAGCVRKKPLLCSNTSSDGSTDGFILIKAVDFPPNDSLILNTPNALICRTTCSGNCSCLAYAYNSQSQCLLWHDHVLDLKNISVDVGYADNQRPSFFLKLAASEIKNELNTGNNLGHKSNSSKKLSKIGIFVAVAAMLILGLFVYFYYKWKKLRGSGEDLLQFDVGMGMKVESSDHNEADKIEKVDKREVKLPFFSFTSVSAATDNFSAENKLGEGGFGPVYKGKLLNGDEVAVKRLSKRSGQGWDELKNEAMLIAKLQHNNLVRLLGCCVERDEKMLIYELMPNKSLDFILFDASKSMMLDWETRVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDIKMNPKISDFGMARMFGGNEVEANTNRIVGTYGYMSPEYALEGLFSVKSDVFSFGVLFLEIMTGKKNTGFYNMNSLNLLAYAWGLWTTGRAIEMMDPVLKYASNKQNMMIRYVNIAFLCVQEYPADRPVMSDVVSMLSNENVVLPCPKPPAFLYARGTKNSSSVGSSTGNVSLNIMTASVIEAR* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1420 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Lan8g1420 879 SUPERFAMILY alpha-D-mannose-specific plant lectins 113 220 IPR036426 -
Lan8g1420 879 Gene3D Phosphorylase Kinase; domain 1 535 636 - -
Lan8g1420 879 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 58 877 - -
Lan8g1420 879 Gene3D Transferase(Phosphotransferase) domain 1 637 838 - -
Lan8g1420 879 PIRSF SRK 37 879 IPR024171 GO:0004674
Lan8g1420 879 CDD B_lectin 72 189 IPR001480 -
Lan8g1420 879 Gene3D - 60 187 IPR036426 -
Lan8g1420 879 ProSiteProfiles Bulb-type lectin domain profile. 65 186 IPR001480 -
Lan8g1420 879 SMART serkin_6 561 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1420 879 Pfam S-locus glycoprotein domain 280 344 IPR000858 GO:0048544
Lan8g1420 879 CDD STKc_IRAK 567 832 - -
Lan8g1420 879 Pfam Protein tyrosine and serine/threonine kinase 563 832 IPR001245 GO:0004672|GO:0006468
Lan8g1420 879 Pfam Domain of unknown function (DUF3403) 834 879 IPR021820 GO:0004674
Lan8g1420 879 Pfam D-mannose binding lectin 113 214 IPR001480 -
Lan8g1420 879 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 58 877 - -
Lan8g1420 879 CDD PAN_AP_plant 363 455 - -
Lan8g1420 879 SMART ntp_6 373 446 IPR003609 -
Lan8g1420 879 ProSiteProfiles Protein kinase domain profile. 561 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1420 879 SUPERFAMILY Protein kinase-like (PK-like) 544 853 IPR011009 -
Lan8g1420 879 Pfam PAN-like domain 373 432 IPR003609 -
Lan8g1420 879 ProSiteProfiles PAN/Apple domain profile. 366 449 IPR003609 -
Lan8g1420 879 SMART blect_4 71 189 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1420 Lan-Chr8 21241984 21245717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1420 537 878 Receptor kinase-like Gene Family AT4G23250 56.734 8.13e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan8g1420 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1420 - - lang:109355122 1744.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1420 8 21241984 21245717 Lan8g1420 8 21241984 21245717 ECH