Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1413 ATGATGCTATCATCTTTACCATCTTCCCTAACAAGGAGCAGATTGGAAGAAATGCTTGATTCGCTTCGCCAGACGGACGAAGAAGAGAAGCAGAAGGACTCGCCGCCGGCATTGCCTCCACGGCCGGTCTCAAGGGCACGGCTTCCTTCGGCGAGGCGGTCCTTGCCGAATAACTTGAATGACTTCAAGGTCAGCGGTGACCACGGTGCCGAGGAGTGTTTGCCAAATGGATTTGATGCCAAGGATGAGAGCATGAGGAAGGAGAAAGAGTTGGGACATAAGAGAAGTAGTAGTTTTGGGAGCAAGAGGGTGAAGATGGATGTGGAATACTATTGTGCTACACCACAAGAGAACATGTCACTTTTGACATGTAATGCTTCATCAGGGGAGATTGAGGAGTTGGAGGATGACTGCATTTCTTATTTCATCAAAAAGAAACTTCGTGTTTGGTGTAAGGAACCAAGAGGAAAGTGGGAACTAGGAACAATACTGTCAACCTCAGGAGAGGAAGCATCTGTTTCAATCTCAAATAGAAATGTTATGAAAGTGGACAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGCGGATGATCTTATGAAGCTCAGTTATTTGAACGAGCCATCAGTTCTTCGTAATCTTAAGTTCAGATATTCTAAGGAGATGATTTATAGTAAAGCAGGTCCCGTTTTGATTGCACTCAATCCCTTCAAAGACCTCTCGATTTATGGAACTGATTATGTCTCAGCTTACAGGCAGAAATTTATTGACGCTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAGCGATATGCTAAGAGATGAAGTAAATCAGTCAATAATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACGGCAAAAATTGCTATCCAATACTTAGCTGCTGTTGGTGGTGGCAGTGGTGGGATAGAAAACAAACTCCTTCAAACAAGTTGTATACTAGAAGCTTTTGGGAATGCAAAAACATTTGAGAACGACAACTCTAGCAGATTTGGAAAATTGATTGAAATTTGTTTCACCACAATGGGTAAAATATGCGGGGCGAAGGTTCAAACTTTTTTGTTTGAAAAGTCAAGAGTGGTTCAATCGGGCAGCACTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGAGCTTCATCTGCTCTTAAAGAGACGCTGAATCTTAGACCTATCAGTGAATATAAATATCTTAATCAGAGTGACTGCGTGAAAATTGCCGGTGTTGATGATGCTAGAAAATTTCAGGAGCTGATGAGAGCACTGGATACTGTTCAAATTTGTGAAGAGGATCAAGAGCTGATCTTTAAGATGGTTGCTGCAGTACTATGGTTGGGAAATATATCATTCCAAGTTAATGACAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTGCGGCCCTGTTGATGGGCTGCAGCTCCCAGGAATTAATGGCAGCATTATCTACCGGTCGAGCTCAATCTGAAGATGGTACTATTACCAAAAAGCTGTCACTGCAGCAGGCAATTGATACTAGAGGTGCAATTGCAAAATTTATCTATGCAACCTTGTTTGAGTGGCTAGTAGAACAACTGAACAAGTCACTTCAAGTGGGTAAAAAATGTACCGGTAAATCCATAAGTATCCTTGATATTTATGGGTTTGAGACCCTCCAGAAAAACAGCTTTGAACAATTCTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATTTGTTTAAACTTGAGCAGCAGGACTATGAATCCGATGGCATTGATTGGACTAAAATAGATTTTGTGGACAATCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTTTGGGTCTACTCTCTTTGTTGGATGAGGAATCAAATTTACCCAAGGCTTCTGATCTAACATTTGCCAATAAACTTAAGCAGCATCTGAGTCCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCGGTGTTCGTCACTATAGAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAGAAGAACAGAGATTTGCTGCCATTTGATTCCGTCCAACTTCTGTCGTCATGTAATTGTGAACTGCTGCAGTTTTTCGCCAAAGTCTCTAGTCAGTCTCAGAAGGAATCAAATTCCTTTCACACGTCTGCACTGGACTCACAAAAGCAGAGTATTGGAACGAAGTTAAAGGGTCAATTGTTCATGTTGATGTGTCAGTTGGAAAGCACCAAACCTCACTTTATTCAGTGCATAAGGCCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGACCTTGTCCTACAACAGATCAGGTGTTGTGGAGTTCTAGAGGTTGCTAGAATTTCAAGGGTCGGTTATTCTAATCGAATGACTCATCAAGAGTTCTCTGAAAGGTACGGGTTTCTGCTTTCTGAGGCCAACGTATCCCAGGATCCATTGAGCATCTCAGTTGCTATTTTGCAACAATTTAATATCCCTTGTGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGAGCAGGGCAGATCGGTGCACTGGAGGATAAGAGAAAACAGGTTTTGCAGGGAATACTCGGGGTTCAAAAATGCTTCCGTGGTTATCAAGCTCGCAGTTACTTCCGTGAATTTACGAATGGAGTGACAACATTACAATCAGTTGTTCGTGGAGAAATTACGAGAATAAAATATGGTATTACAGTGAAATCTTCTATAACAATTTATTCCAAAAAACTTGAGGAGATCCATGCGATCATACAACTACAGTCTGTAATTCGTGGGTGGATGGTTCGAAAGGGTGCCAGTGGCATGCACAAGTTGAAGAAATATCCTGAGAATGCAAAACCTAGATACGAATCACGTGTGAAGAAACCAGAAGTGAAGCAGGATATGACCAAAGAGCAGCTCCTGTCAACTTTAGAAGAACTCCAAAGGCGGGTTGACAATGCTGAAGCGATTGCAGAGAAGAAGGAAGTGGAAAATACTGAATTGAAGGAACGGCTGAAACAATCTGAGGAAAGGTGGACTGAATATGAGGCAAAGATGAAATCAGTGGAGGAGGTGTGGCAAAGACAGATGGCATCGTTGCAGATAAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGGTAATGTTCAAACTACAAGATGTGATGTTGTGTCGCCTCACTATTATGATTCTGAAGATGCTACTTCCGTGGGATCTCAACTAACATGTGCGAGCACGCCTATGAAGATTTCTGGTGGTCTCTCTGTTTCTGATGGAGGAAGACTGGCTAATGTTAATTTCACTACAGTCAGCAATCTGATGATGGAATTCGAGCAGCAGACACAGAACTTCGATGATGAAGTAAAAGTTCTGAATGAGGTTAAACCAGGGCAGTCTGCTAACTTGAATAACATTCAAGAACTTCGGAAACTTAAACAGAGATTTGAGGGATGGAAGAAGCAATACAAGGTTAGATTACACGATACAAAAGCAAGGCTTCATAAATCAGAGGCGGATAAAAGTCGGCGGACATGGTGGGGGAAATTAAACTCGAGAGCGTAA 3600 0.4194 MMLSSLPSSLTRSRLEEMLDSLRQTDEEEKQKDSPPALPPRPVSRARLPSARRSLPNNLNDFKVSGDHGAEECLPNGFDAKDESMRKEKELGHKRSSSFGSKRVKMDVEYYCATPQENMSLLTCNASSGEIEELEDDCISYFIKKKLRVWCKEPRGKWELGTILSTSGEEASVSISNRNVMKVDRSELLPANPDILEGADDLMKLSYLNEPSVLRNLKFRYSKEMIYSKAGPVLIALNPFKDLSIYGTDYVSAYRQKFIDAPHVYAMADAAYSDMLRDEVNQSIIISGESGSGKTETAKIAIQYLAAVGGGSGGIENKLLQTSCILEAFGNAKTFENDNSSRFGKLIEICFTTMGKICGAKVQTFLFEKSRVVQSGSTERSYHIFYQLCAGASSALKETLNLRPISEYKYLNQSDCVKIAGVDDARKFQELMRALDTVQICEEDQELIFKMVAAVLWLGNISFQVNDSENHIEVVDDEAVTSAALLMGCSSQELMAALSTGRAQSEDGTITKKLSLQQAIDTRGAIAKFIYATLFEWLVEQLNKSLQVGKKCTGKSISILDIYGFETLQKNSFEQFCINYANERLQQHFNRHLFKLEQQDYESDGIDWTKIDFVDNQECLDLFEKKPLGLLSLLDEESNLPKASDLTFANKLKQHLSPNPCFKGERGRAFGVRHYRGEVLYDTNGFLEKNRDLLPFDSVQLLSSCNCELLQFFAKVSSQSQKESNSFHTSALDSQKQSIGTKLKGQLFMLMCQLESTKPHFIQCIRPNTKQLPGIYDEDLVLQQIRCCGVLEVARISRVGYSNRMTHQEFSERYGFLLSEANVSQDPLSISVAILQQFNIPCEMYQVGYTKLYLRAGQIGALEDKRKQVLQGILGVQKCFRGYQARSYFREFTNGVTTLQSVVRGEITRIKYGITVKSSITIYSKKLEEIHAIIQLQSVIRGWMVRKGASGMHKLKKYPENAKPRYESRVKKPEVKQDMTKEQLLSTLEELQRRVDNAEAIAEKKEVENTELKERLKQSEERWTEYEAKMKSVEEVWQRQMASLQISLVAARKSLASENGNVQTTRCDVVSPHYYDSEDATSVGSQLTCASTPMKISGGLSVSDGGRLANVNFTTVSNLMMEFEQQTQNFDDEVKVLNEVKPGQSANLNNIQELRKLKQRFEGWKKQYKVRLHDTKARLHKSEADKSRRTWWGKLNSRA* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1413 1199 Gene3D Kinesin motor domain 196 800 IPR036961 -
Lan8g1413 1199 SMART MYSc_2a 191 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 ProSiteProfiles IQ motif profile. 871 898 IPR000048 GO:0005515
Lan8g1413 1199 Gene3D - 801 868 - -
Lan8g1413 1199 MobiDBLite consensus disorder prediction 16 35 - -
Lan8g1413 1199 ProSiteProfiles IQ motif profile. 929 957 IPR000048 GO:0005515
Lan8g1413 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 948 IPR027417 -
Lan8g1413 1199 Coils Coil 981 1036 - -
Lan8g1413 1199 PRINTS Myosin heavy chain signature 227 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 PRINTS Myosin heavy chain signature 281 306 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 PRINTS Myosin heavy chain signature 324 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 PRINTS Myosin heavy chain signature 556 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 PRINTS Myosin heavy chain signature 609 637 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 MobiDBLite consensus disorder prediction 74 98 - -
Lan8g1413 1199 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Lan8g1413 1199 Pfam IQ calmodulin-binding motif 931 947 IPR000048 GO:0005515
Lan8g1413 1199 Gene3D Myosin VI head, motor domain, U50 subdomain 437 545 - -
Lan8g1413 1199 Gene3D - 568 757 - -
Lan8g1413 1199 MobiDBLite consensus disorder prediction 1 15 - -
Lan8g1413 1199 SMART iq_5 928 950 IPR000048 GO:0005515
Lan8g1413 1199 SMART iq_5 868 890 IPR000048 GO:0005515
Lan8g1413 1199 SMART iq_5 891 913 IPR000048 GO:0005515
Lan8g1413 1199 Gene3D - 873 917 - -
Lan8g1413 1199 Coils Coil 12 32 - -
Lan8g1413 1199 PANTHER MYOSIN-2 ISOFORM X1 126 1198 - -
Lan8g1413 1199 Coils Coil 1198 1199 - -
Lan8g1413 1199 ProSiteProfiles Myosin motor domain profile. 197 867 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 PANTHER MYOSIN 126 1198 - -
Lan8g1413 1199 Gene3D - 380 436 - -
Lan8g1413 1199 CDD MYSc_Myo8 211 855 IPR036022 -
Lan8g1413 1199 Pfam Myosin head (motor domain) 200 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 144 193 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan8g1413 1199 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1413 Lan-Chr8 21195955 21205690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1413 1 1194 Myosins gene family AT5G54280 57.993 0.0 1402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1413 K10357 - gmx:100819335 1633.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1413 8 21195955 21205690 Lan8g1413 8 21195955 21205690 ECH